Structure of PDB 7yi4 Chain I Binding Site BS01

Receptor Information
>7yi4 Chain I (length=107) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAE
ILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPNI
QSVLLPK
Ligand information
>7yi4 Chain O (length=151) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ctggagaatcccggtctgcaggccgctcaattggtcgtagacagctctag
caccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgccaagg
ggattactccctagtctccaggcacgtgtcagatatatacatcctgtgca
t
Receptor-Ligand Complex Structure
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PDB7yi4 Diverse modes of H3K36me3-guided nucleosomal deacetylation by Rpd3S.
Resolution3.96 Å
Binding residue
(original residue number in PDB)		A14 R17 R32 R42
Binding residue
(residue number reindexed from 1)		A3 R6 R21 R31
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Cellular Component
External links
PDB RCSB:7yi4, PDBe:7yi4, PDBj:7yi4
PDBsum7yi4
PubMed37468628
UniProtP06897|H2A1_XENLA Histone H2A type 1

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