Structure of PDB 7nad Chain I Binding Site BS01

Receptor Information
>7nad Chain I (length=334) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSML
ALVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVG
RLQSLSKTPSNAAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRR
ICKPRISTDPTSIQIIQTFETLLNEDEEGSISFEILRIFNKILKTRNFNI
EESVLNMLLSLDVLHDYDPNTKLKGNVSAPKLKKKDRVHLSKKQRKARKE
MQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKNNAKTLIGSV
LEGLTKFGNMANYRSLRLADPLNNEIIKPSVNVS
Ligand information
>7nad Chain 1 (length=697) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
augccugaauagggugaagccagaggaaacucugguggaggcucgcgaau
uuggguauaguagcaaauauucaaaugagaacuuugaagacugaaguggg
gaaagguuccacgucaacagcaguuggacguggguuagucgauccuaaga
gaugguuucaaaggccugacaggccaccaucgaaagggaauccgguuaag
auuccggaaccuggauauggauucuucacgguaacguaacugaaugugga
gacgucggcgcgagcccugggaggaguuaucuuuucuucuuaacagcuua
ucaccccggaauugguuuauccggagauggggucuuauggcuggaagagg
ccagcaccuuugcuggcuccggugcgcuugugacggcccgugaaaaucca
caggaaggaauaguuuucaugccaggucguacugucuccaaggugaacag
ccucuaguugauagaagauaagggaagucgguccguaacuucgggauaag
gauuggcucuaagggucggguagugagggccuuggucacggccuuggcuu
gcuacaauuaacgaucaacuuagaacugguacggacaaggggaaucugac
uguuaacgagauucccacugucccuaucuacuaucuagcgaggcugucug
aucaggcauugcguaagcaguagaguagccguuacgaucugcugaga
<<<<<<<<...<<<....<<<<<<<....>>>>>>>.....>>>......
>>>>>>>>....<<.....<<<<<<.......>>>>>><<<<.....<<<
<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...<<
............<<<<<<.>>>>>>....>>....>>...<<<<<.....
...>>>>>))<<<<.<<<<<<......<<<....>>>.......<<<<<<
...<<<<.<<<<<<<.<<<<<<<<<<..(((..>>>>>><...<<<<<..
..<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<
<<<<<......>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>
>>............>>.>>>>>>>>>>>>..>>.>>>>>.<<<<.....>
>>>..>>>>..<<<<.<<<<.<<........<<<<<<.<<<<........
.............<<<<<.<<<<<<<<..<<..<<<<..>>>>..>>>>>
>>>>>......>>>>>......>>>...>>>>>>>....<<<<<<<<<..
......>>.>>>>>>>.....>>.>>>>.....>>>>>>...<<<<<<<)
)).>>>>>..>>....<<<<....<<.......>>...>>>>.....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7nad Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Resolution3.04 Å
Binding residue
(original residue number in PDB)		K360 K363 R366 V367 L369 S370 K371 K372 R374 K375 R377 K378 Q381
Binding residue
(residue number reindexed from 1)		K231 K234 R237 V238 L240 S241 K242 K243 R245 K246 R248 K249 Q252
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003682 chromatin binding
GO:0005515 protein binding
Biological Process
GO:0006260 DNA replication
GO:0006267 pre-replicative complex assembly involved in nuclear cell cycle DNA replication
GO:0006270 DNA replication initiation
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
GO:0042273 ribosomal large subunit biogenesis
GO:0051301 cell division
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005656 nuclear pre-replicative complex
GO:0005730 nucleolus
GO:0030691 Noc2p-Noc3p complex

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Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7nad, PDBe:7nad, PDBj:7nad
PDBsum7nad
PubMed36482249
UniProtQ07896|NOC3_YEAST Nucleolar complex-associated protein 3 (Gene Name=NOC3)

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