Structure of PDB 6tmf Chain I Binding Site BS01 |
|
|
| >6tmf Chain A (length=1485)
[Search RNA sequence]
[Download ligand structure]
[Download structure with residue number starting from 1]
[View ligand structure]
|
auuccgguugauccugccggaggccacugcuauggggguccgacuaagcc
augcgagucauggggcgccuugcgcgcaccggcggacggcucaguaacac
gucgguaaccuacccucgggagggggauaaccccgggaaacuggggcuaa
ucccccauaggccugagguacuggaagguccucaggccgaaaggggcucu
gcccgcccgaggaugggccggcggccgauuagguaguuggugggguaacg
gcccaccaagccgaagaucgguacgggccaugagagugggagcccggaga
uggacacugagacacggguccaggcccuacggggcgcagcaggcgcgaaa
ccuccgcaaugcgggcaaccgcgacggggggacccccagugccguggcaa
cgccacggcuuuuccggaguguaaaaagcuccgggaauaagggcugggca
aggccgguggcagccgccgcgguaauaccggcggcccgagugguggccgc
uauuauugggccuaaagcguccguagccgggcccguaagucccuggcgaa
aucccacggcucaaccguggggcuugcuggggauacugcgggccuuggga
ccgggagaggccggggguaccccugggguaggggugaaauccuauaaucc
cagggggaccgccaguggcgaaggcgcccggcuggaacggguccgacggu
gagggacgaaggccaggggagcgaaccggauuagauacccggguaguccu
ggcuguaaaggaugcgggcuaggugucgggcgagcuucgagcucgcccgg
ugccgaagggaagccguuaagcccgccgccuggggaguacggccgcaagg
cugaaacuuaaaggaauuggcgggggagcacuacaagggguggagcgugc
gguuuaauuggauucaacgccgggaaccucaccgggggcgacggcaggau
gaaggccaggcugaaggucuugccggacacgccgagaggaggugcauggc
cgccgucagcucguaccgugaggcguccacuuaagugugguaacgagcga
gacccgcgcccccaguugccaguccuucccgcuggggaggaggcacucug
gggggaccgccggcgauaagccggaggaaggagcgggcgacgguagguca
guaugccccgaaacccccgggcuacacgcgcgcuacaaugggcgggacaa
ugggauccgaccccgaaaggggaagggaauccccuaaacccgcccccagu
ucggaucgcgggcugcaacucgcccgcgugaagcuggaaucccuaguacc
cgcgugucaucaucgcgcggcgaauacgucccugcuccuugcacacaccg
cccgucacuccacccgagcgggguccggaugaggccugaucucccuucgg
ggaggucgggucgagucugggcuccgugaggggggagaagucguaacaag
guagccguaggggaaccuacggcucgaucaccucc |
..<<<<<<.[.((((>>>>>><<<<<<<<<..<<<<<<.<<......<<<
.<<<..<<<..<<.<<<<.....>>>>.>>>>>......<<........<
<<<<<<..<<...<<<<<<<.<<<<<....<<<<<<....>>>>>>....
.>>>>>...<<<<<<<<<.<<......>>>>>>>>>>>.....<<<<...
>>>>.>>>>>>>..>>>>>>>>>.<<<....<<<..<<<<<<<<......
.>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>.
<<<<<............>>>>>.<<<<....>>>>...>>>>>>......
...<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<<<<<..
.>>>>>>>>...<<<<<<<<.......>>>>>>>>.....<<<<<((...
...<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>..
........<<<((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<...
.<<<<<<<<.....>>>>>>>>...>>>>>>>>..>>>>>>>>>...<<<
<<<.....<<<<<<<<<..<<<<<<<<<..<<<......>>>.....>>>
>>>>>>..>>.......<<....>>.>>>>>>>....>>>.>>>...>>>
...>>>>...<<<<<<<...<<...<<<<.<.....>.>>>>...>>>>>
>>>>.........<<<<<<..<<<<<<<<<<<<<<.....>>>>>>>>>>
>>>>...<<..))>>.....>>>>>>.>>>.<<<......<<<<....>>
>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<..<<<<<<<
<<<......<<........>>..........<<<<<<<...<<<<.....
....<...<<<.....>>>....>......>>>>...<<.<<<..<<<<<
<<<<....<<<<<<.<<....>>...<<<<......>>>>..>>>>>>..
..<<<<<.<<<<<<<..<<...<<<<<<<<...>>>>>>>>.>>...>>>
>>>>.....<<<<<.....>>>>>........>>>>>....>>>.>>>..
.>>>>>>>>....>>>>>>>...>>.>>>>>>>>.....<<<<<<<....
.<<<..<<..<<<<....>>>>..>>....>>>.....>>>>>>>.....
......<<<<<<<........>>>>>>>..........>>>>>>.....<
<<<<<<.......>>>>>>>.......>>...>>>>>>>>>>.>>....<
..<<.<.<<<<.<<<..<<<<<<<<<<<<<..<<<<<<<<<<<<<....>
>>>>>>>>>>>>..>>>>>>>>>>>>>..>>>.>>>>..>.>>...>...
..<<<<<<<<<....>>>>>>>>>........... |
|
| Global view | Local view | Structure summary |
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
[Spin on]
[Spin off]
[Reset]
[High quality]
[Low quality]
[White background]
[Black background]
|
| PDB | 6tmf Molecular analysis of the ribosome recycling factor ABCE1 bound to the 30S post-splitting complex. |
| Resolution | 2.8 Å |
Binding residue
(original residue number in PDB) | A2 K3 R8 H46 H48 G49 H51 A52 K54 K58 R66 N69 K70 R73 S74 G75 S77 K80 H84 F85 M86 R87 R88 E89 H90 R91 L93 M94 S95 K97 M98 K99 R145 R156 D159 K163 S170 C173 Y174 R175 K177 Y180 |
Binding residue
(residue number reindexed from 1) | A1 K2 R7 H45 H47 G48 H50 A51 K53 K57 R65 N68 K69 R72 S73 G74 S76 K79 H83 F84 M85 R86 R87 E88 H89 R90 L92 M93 S94 K96 M97 K98 R144 R155 D158 K162 S169 C172 Y173 R174 K176 Y179 |
|
|
| Enzyme Commision number |
? |
|
|
|
|
|
