Structure of PDB 6ju0 Chain I Binding Site BS01
Receptor Information
>6ju0 Chain I (length=213) Species:
10090
(Mus musculus) [
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EVKLEESGGGLVQPGGSMKLSCAASGFIFSDAWMDWVRQSPERGLEWVAE
IRSKANGLAPYYAESVKGRFTISRDDSKSSVYLQMNNLRSEDTGIYYCTS
TLYYFDYWGQGTTLTVSSAKTTPPSVYPLAPNSMVTLGCLVKGYFPEPVT
VTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPA
SSTKVDKKIVPRD
Ligand information
Ligand ID
PE3
InChI
InChI=1S/C28H58O15/c29-1-3-31-5-7-33-9-11-35-13-15-37-17-19-39-21-23-41-25-27-43-28-26-42-24-22-40-20-18-38-16-14-36-12-10-34-8-6-32-4-2-30/h29-30H,1-28H2
InChIKey
ILLKMACMBHTSHP-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
OCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO
OpenEye OEToolkits 1.5.0
C(COCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCOCCO)O
ACDLabs 10.04
O(CCOCCOCCOCCOCCOCCOCCO)CCOCCOCCOCCOCCOCCOCCO
Formula
C28 H58 O15
Name
3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL;
POLYETHYLENE GLYCOL
ChEMBL
DrugBank
ZINC
ZINC000058633580
PDB chain
6ju0 Chain I Residue 301 [
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Receptor-Ligand Complex Structure
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PDB
6ju0
Structural basis of polyethylene glycol recognition by antibody.
Resolution
2.601 Å
Binding residue
(original residue number in PDB)
D31 W33 Y103 Y104
Binding residue
(residue number reindexed from 1)
D31 W33 Y103 Y104
Annotation score
1
External links
PDB
RCSB:6ju0
,
PDBe:6ju0
,
PDBj:6ju0
PDBsum
6ju0
PubMed
31907057
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