Structure of PDB 4dyu Chain I Binding Site BS01

Receptor Information
>4dyu Chain I (length=155) Species: 187410 (Yersinia pestis KIM10+) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELLYTRNDVEEHVKVATIKRLNQMVIQFIDLSLITKQAHWNMRGANFVAV
HEMLDGFRTALTDHLDTFAERAVQLGGVALGTAQVINDKTPLKSYPTNIH
SVQEHLKALAERYAIVANDIRKAITEVEDENSADMFTAASRDLDKFLWFI
ESNIE
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4dyu Chain I Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4dyu The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10
Resolution2.75 Å
Binding residue
(original residue number in PDB)		D78 E82
Binding residue
(residue number reindexed from 1)		D66 E70
Annotation score1
Enzymatic activity
Enzyme Commision number 1.16.-.-
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008199 ferric iron binding
GO:0016491 oxidoreductase activity
GO:0016722 oxidoreductase activity, acting on metal ions
GO:0046872 metal ion binding
Biological Process
GO:0006879 intracellular iron ion homeostasis
GO:0030261 chromosome condensation
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4dyu, PDBe:4dyu, PDBj:4dyu
PDBsum4dyu
PubMed
UniProtQ7CJ65|DPS_YERPE DNA protection during starvation protein (Gene Name=dps)

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