Structure of PDB 3b9j Chain I Binding Site BS01
Receptor Information
>3b9j Chain I (length=162) Species:
9913
(Bos taurus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
ADELVFFVNGKKVVEKNADPETTLLAYLRRKLGLRGTKLGCGEGGCGACT
VMLSKYDRLQDKIIHFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQ
ERIAKSHGSQCGFCTPGIVMSMYTLLRNQPEPTVEEIEDAFQGNLCRCTG
YRPILQGFRTFA
Ligand information
Ligand ID
FES
InChI
InChI=1S/2Fe.2S
InChIKey
NIXDOXVAJZFRNF-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
[Fe]1S[Fe]S1
CACTVS 3.341
OpenEye OEToolkits 1.5.0
S1[Fe]S[Fe]1
Formula
Fe2 S2
Name
FE2/S2 (INORGANIC) CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
3b9j Chain I Residue 601 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3b9j
Substrate orientation in xanthine oxidase: crystal structure of enzyme in reaction with 2-hydroxy-6-methylpurine.
Resolution
2.3 Å
Binding residue
(original residue number in PDB)
C113 G114 C116 C148 C150
Binding residue
(residue number reindexed from 1)
C111 G112 C114 C146 C148
Annotation score
1
Enzymatic activity
Enzyme Commision number
1.17.1.4
: xanthine dehydrogenase.
1.17.3.2
: xanthine oxidase.
Gene Ontology
Molecular Function
GO:0005506
iron ion binding
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0051536
iron-sulfur cluster binding
GO:0051537
2 iron, 2 sulfur cluster binding
View graph for
Molecular Function
External links
PDB
RCSB:3b9j
,
PDBe:3b9j
,
PDBj:3b9j
PDBsum
3b9j
PubMed
18063585
UniProt
P80457
|XDH_BOVIN Xanthine dehydrogenase/oxidase (Gene Name=XDH)
[
Back to BioLiP
]