Structure of PDB 8cc0 Chain H Binding Site BS01

Receptor Information
>8cc0 Chain H (length=221) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAF
IGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHY
NYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKG
YFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVT
CNVAHPASSTKVDKKIVPRDC
Ligand information
Ligand IDUQC
InChIInChI=1S/C21H28O5/c1-19-7-5-13(23)9-12(19)3-4-14-15-6-8-21(26,17(25)11-22)20(15,2)10-16(24)18(14)19/h9,14-15,18,22,26H,3-8,10-11H2,1-2H3/t14-,15-,18+,19-,20-,21-/m0/s1
InChIKeyMFYSYFVPBJMHGN-ZPOLXVRWSA-N
SMILES
SoftwareSMILES
CACTVS 3.385C[C@]12CCC(=O)C=C1CC[C@H]3[C@@H]4CC[C@](O)(C(=O)CO)[C@@]4(C)CC(=O)[C@H]23
CACTVS 3.385C[C]12CCC(=O)C=C1CC[CH]3[CH]4CC[C](O)(C(=O)CO)[C]4(C)CC(=O)[CH]23
OpenEye OEToolkits 2.0.7CC12CCC(=O)C=C1CCC3C2C(=O)CC4(C3CCC4(C(=O)CO)O)C
OpenEye OEToolkits 2.0.7C[C@]12CCC(=O)C=C1CC[C@@H]3[C@@H]2C(=O)C[C@]4([C@H]3CC[C@@]4(C(=O)CO)O)C
FormulaC21 H28 O5
NameCortisone;
(8S,9S,10R,13S,14S,17R)-10,13-dimethyl-17-oxidanyl-17-(2-oxidanylethanoyl)-1,2,6,7,8,9,12,14,15,16-decahydrocyclopenta[a]phenanthrene-3,11-dione;
17alpha,21-Dihydroxypregn-4-ene-3,11,20-trione
ChEMBLCHEMBL1499
DrugBankDB14681
ZINCZINC000004083557
PDB chain8cc0 Chain H Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8cc0 Structural insight to elucidate the binding specificity of the anti-cortisol Fab fragment with glucocorticoids.
Resolution1.85 Å
Binding residue
(original residue number in PDB)
W47 F50 R57 Y59 Y60 D62 Y104
Binding residue
(residue number reindexed from 1)
W47 F50 R57 Y59 Y60 D62 Y104
Annotation score1
External links