Structure of PDB 7v00 Chain H Binding Site BS01

Receptor Information
>7v00 Chain H (length=296) Species: 176279 (Staphylococcus epidermidis RP62A) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TKVFKLSFKTPVHFGKKRLSDGEMTITADTLFSALFIETLQLGKDTDWLL
NDLIISDTFPYENELYYLPKPLIKIDSNHKAFKKLKYVPVHHYNQYLNGE
LSAEDATDLNDIFNIGYFSLQTKVSLIAQETDSSADSEPYSVGTFTFEPE
AGLYFIAKGSEETLDHLNNIMTALQYSGLGGKRNAGYGQFEYEIINNQQL
SKLLNQNGKHSILLSTAMAKKEEIESALKEARYILTKRSGFVQSTNYSEM
LVKKSDFYSFSSGSVFKNIFNGDIFNVGHNGKHPVYRYAKPLWLEV
Ligand information
>7v00 Chain G (length=30) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
acgagaacuaguaauaauugucauuugcau
..............................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7v00 Structures of an active type III-A CRISPR effector complex.
Resolution3.87 Å
Binding residue
(original residue number in PDB)
H17 F18 K20 K21 L23 T34 S37 A38 F40 I41 T130 K131 V132 S133 L134 Y148 G186 L187 G189 K190 N192 S247 F249 Q251 E257 K261 K262 H291 P292 V293
Binding residue
(residue number reindexed from 1)
H13 F14 K16 K17 L19 T30 S33 A34 F36 I37 T122 K123 V124 S125 L126 Y140 G178 L179 G181 K182 N184 S239 F241 Q243 E249 K253 K254 H283 P284 V285
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:7v00, PDBe:7v00, PDBj:7v00
PDBsum7v00
PubMed35714601
UniProtQ5HK92

[Back to BioLiP]