Structure of PDB 7syp Chain H Binding Site BS01 |
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>7syp Chain 2 (length=1680)
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uaccugguugauccugccaguagcauaugcuugucucaaagauuaagcca ugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucau uaaaucaguuaugguuccuuuggucgcucgacuuggauaacugugguaau ucuagagcuaauacaugccgacgggcgcugacccccuucgcgggggggau gcgugcauuuaucaguggugacucuagauaaccucgggccgaucgcacgc ccggcggcgacgacccauucgaacgucugcccuaucaacuuucgauggua gucgccgugccuaccauggugaccacgggugacggggaaucaggguucga uuccggagagggagccugagaaacggcuaccacauccaaggaaggcagca ggcgcgcaaauuacccacucccgacccggggagguagugacgaaaaauaa caauacaggacucuuucgaggcccuguaauuggaaugaguccacuuuaaa uccuuuaacgaggauccauuggagggcaagucuggugccagcagccgcgg uaauuccagcuccaauagcguauauuaaaguugcugcaguuaaaaagcuc guaguuggaucuugcucggcgccggcccgaagcguuuacuuugaaaaaau uagaguguucaaagcaggccgccuggauaccgcagcuaggaauaauggaa uaggaccgcgguucuauuuuguugguuuucggaacugaggccaugauuaa gagggacggccgggggcauucguauugcgccgcuagaggugaaauucuug gaccggcgcaagacggaccagagcgaaagcauuugccaagaauguuuuca uuaaucaagaacgaaagucggagguucgaagacgaucagauaccgucgua guuccgaccauaaacgaugccgaccggcgaugcggcggcguuauucccau gacccgccgggcagcuuccgggaaaccaaagucuuuggguuccgggggga guaugguugcaaagcugaaacuuaaaggaauuuggcgaagggcaccacca ggaguggagccugcggcuuaauuugacucaacacgggaaaccucacccgg cccggacacggacaggauugacagauugauagcucuuucucgauuccgug ggugguggugcauggccguucuuaguugguggagcgauuugucugguuaa uuccgauaacgaacgagacucuggcaugcuaacuaguuacgcgaccccgg ucggcguaacuucuuagagggacaaguggcguucagccacccgagauuga gcaauaacaggucugugaugcccuuagauguccggggcugcacgcgcgcu acacugacuggcucagcgugugccuacccuacgccggcaggcgcggguaa cccguugaaccccauucgugauggggaucggggauugcaauuauucccca ugaacgaggaauucccaguaagugcgggucauaagcuugcguugauuaag ucccugcccuuuguacacaccgcccgucgcuacuaccgauuggaugguuu agugaggcccucggaucggccccgccggggugcccuggcggagcgcugag aagacggucgaacuugacuaucuagaggaaguaaaagucguaacaagguu uccguaggugaaccugcggaaggaucauua |
...<<<<<.[.((((>>>>><<<.<<<<<<...<.<<.........<<<. <<<..<<....<<....<<..........>>...>>.>>......<<... .....<<<......<<....<<<<.........<<.....<<.<<..... ..>>.>>......>>.........<<<<...<<<<<<....>>>>>>... >>>><<..<<<<<...<......>..>>>>>......>>...<<<<.<<< ...>>>>>>>..>.>>>...>>....>>>.<<<....<<<....<<<<<< <.........>>>>>>>>>>......>>>...<<<.<<<<....>>>>.. ..>>>.>>.<<.<<<..........>>>.>>.<.<<<..>>>.>...>>> >>>.........<<<...<<<<.....>>>.>>>>......>>.>..... <<<..<<<..<<<....>>>...>>>...>>>......<<..<....... ....>..>>.........<<<<<((......<<<<.....<<..))>>.. .....>>>>.>>>>>..>>>>>>.>>>.........<.<((.....<.<< ...<.<.<<....<<<<<<.<<..>>>>>>.>>..<<<<<<.<....... <<...<.......>.<<<<.>>>>...>>......>.>>>..>>>..... ...<.<<.<<<<<<<...............>>>>>>>.>>.>....>>.. ..<<<<<<..<...<<<<..<<<.<<<<<<<<...<<<......>>>... ...>>>>>>>>.>>>.......<<....>>...>>>>..>..>>>.>>>. ..>.>...>>.>....<<<<<<....<...<<<<.<.....>.>>>>... >.>>>>>>..........<<<.<<.<<<..<.<<<<<<.<<<........ >>>>>>>>>.>..>>>...<<..))>>...>>.....>>>.>.>.<<<.. ....<<<......>>>....>>>..)))).]..<...<<<<<<<..<<.. <<<<<.<<<<.<<<<<<......<<........>>..........<<<<< ......<<<<<<........<..<<........>>.>.......>>>>>> .<.<<.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<.... ..>>>...>>.>>>....<<<...<...<<<<..<<<<<<<<<<<<..>> >>.>>>>>>>>..>>>>..>.....<<<<<.....>>>>>........>> >....>>>.>>>.....>>>>>>>>......>>>>>...>>.>>>>.>>> .>...<<.<<<........<.......<<<.<<<<....>>>>.>>>... .>.........>>>.>>......<.....<<<<<..........>>>>>. ....>.....>>>>>.....<<<<<<<<.......>>>>>>>>......> >...>>>>>>>..>.......<..<<.<..<<<<.<<....<<<<<<<<. <<<..<<<<.<<...<<<<<..<<..............>>....>>>>>. ..>>.>>>>..>>>.>>>>>>>>...>>.>>>>...>.>>...>.....< <<<<<<<<....>>>>>>>>>......... |
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PDB | 7syp Molecular architecture of 40S translation initiation complexes on the hepatitis C virus IRES. |
Resolution | 4.0 Å |
Binding residue (original residue number in PDB) | K2 N4 S6 P8 Q13 L15 R31 S53 N56 Q59 G60 Q65 G66 R74 L75 C83 Y84 R85 R87 R88 G90 R92 R94 S96 V108 N110 R131 R132 L133 G134 K136 R137 S139 R140 R154 Q155 R159 K160 L162 K164 K167 R170 K172 A173 P174 K175 I176 R178 L179 R183 Q186 H187 R189 R190 R191 K195 K196 R198 T199 K201 N202 L237 |
Binding residue (residue number reindexed from 1) | K2 N4 S6 P8 Q13 L15 R31 S53 N56 Q59 G60 Q65 G66 R74 L75 C83 Y84 R85 R87 R88 G90 R92 R94 S96 V108 N110 R131 R132 L133 G134 K136 R137 S139 R140 R154 Q155 R159 K160 L162 K164 K167 R170 K172 A173 P174 K175 I176 R178 L179 R183 Q186 H187 R189 R190 R191 K195 K196 R198 T199 K201 N202 L237 |
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Enzyme Commision number |
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