Structure of PDB 6pdu Chain H Binding Site BS01

Receptor Information
>6pdu Chain H (length=216) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QVQLVESGGGLVKPGGSQRLSCVVSGLTLSTSDIHWVRQAPGKGLEWVSV
ISTNGVATYYAESVKGRFTISRDIAKNSFFLQMNSLRVEDTAVYYCTDFD
FWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVT
VSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHK
PSNTKVDKKVEPKSCD
Ligand information
>6pdu Chain C (length=8) Species: 11676 (Human immunodeficiency virus 1) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
AVGIGAVF
Receptor-Ligand Complex Structure
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PDB6pdu Modular recognition of antigens provides a mechanism that improves vaccine-elicited antibody-class frequencies
Resolution1.953 Å
Binding residue
(original residue number in PDB)		S32 D33 Y58 D94 F95 D101
Binding residue
(residue number reindexed from 1)		S32 D33 Y59 D98 F99 D100
External links