Structure of PDB 5exd Chain H Binding Site BS01

Receptor Information
>5exd Chain H (length=291) Species: 264732 (Moorella thermoacetica ATCC 39073) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DLFAEPNLKQITVWARGVVMNKDARDIVVALTEAAAKEGKYVQAWENYVD
LPDRIYVPVRAYARISSDPIESKYIYENETPDIVVLVEESLIKGVPILKG
IRPGSTLVVNTKRSIDTILEFLGDTGNLAQIVTVDANSMAGIAAPIAGAV
VKATGIVDVENLAAVVKNPAAMRRGYAEAQVRQLPPHEAVEEAAVSATEL
LRQMPFAGTVPSPVTENEGMVTGNWRIQRPIIDREACTECYTCWIYCPDS
CITRTEEGPVFNMKYCKGCGLCTAVCPSGALTNVPELDFKD
Ligand information
Ligand IDSF4
InChIInChI=1S/4Fe.4S
InChIKeyLJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
FormulaFe4 S4
NameIRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain5exd Chain H Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB5exd One-carbon chemistry of oxalate oxidoreductase captured by X-ray crystallography.
Resolution2.5 Å
Binding residue
(original residue number in PDB)		P254 C271 C290 K291 G292 C293 G294 C296
Binding residue
(residue number reindexed from 1)		P230 C247 C266 K267 G268 C269 G270 C272
Annotation score1
Enzymatic activity
Enzyme Commision number 1.2.7.10: oxalate oxidoreductase.
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0016625 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding
Biological Process
GO:0033611 oxalate catabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5exd, PDBe:5exd, PDBj:5exd
PDBsum5exd
PubMed26712008
UniProtQ2RI40|OORD_MOOTA Oxalate oxidoreductase subunit delta (Gene Name=Moth_1593)

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