Structure of PDB 5b1m Chain H Binding Site BS01
Receptor Information
>5b1m Chain H (length=92) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAH
YNKRSTITSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTSS
Ligand information
>5b1m Chain I (length=146) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctgaattcagctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5b1m
Testis-Specific Histone Variant H3t Gene Is Essential for Entry into Spermatogenesis
Resolution
2.34 Å
Binding residue
(original residue number in PDB)
R33 K34 E35 S36 I39
Binding residue
(residue number reindexed from 1)
R1 K2 E3 S4 I7
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0030527
structural constituent of chromatin
GO:0046982
protein heterodimerization activity
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005654
nucleoplasm
GO:0005694
chromosome
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:5b1m
,
PDBe:5b1m
,
PDBj:5b1m
PDBsum
5b1m
PubMed
28099840
UniProt
Q9D2U9
|H2B3A_MOUSE H2B.U histone 2 (Gene Name=H2bu2)
[
Back to BioLiP
]