Structure of PDB 4yhy Chain H Binding Site BS01

Receptor Information
>4yhy Chain H (length=218) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVQLVETGGGVVQPGRSLRLSCTASGFTFRDYWMSWVRQAPGKGLEWVAD
INPDGITRYYIDAVKGRFTISRDNAKSSLYLQMNSLGAEDTAVYYCAREF
HSGLGWHFDLWGRGTLVTVSSASTKGPSVFPLAPSTSGGTAALGCLVKDY
FPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYI
CNVNHKPSNTKVDKKVEP
Ligand information
Ligand IDM3L
InChIInChI=1S/C9H20N2O2/c1-11(2,3)7-5-4-6-8(10)9(12)13/h8H,4-7,10H2,1-3H3/p+1/t8-/m0/s1
InChIKeyMXNRLFUSFKVQSK-QMMMGPOBSA-O
SMILES
SoftwareSMILES
CACTVS 3.341C[N+](C)(C)CCCC[C@H](N)C(O)=O
OpenEye OEToolkits 1.5.0C[N+](C)(C)CCCC[C@@H](C(=O)O)N
OpenEye OEToolkits 1.5.0C[N+](C)(C)CCCCC(C(=O)O)N
CACTVS 3.341C[N+](C)(C)CCCC[CH](N)C(O)=O
ACDLabs 10.04O=C(O)C(N)CCCC[N+](C)(C)C
FormulaC9 H21 N2 O2
NameN-TRIMETHYLLYSINE
ChEMBLCHEMBL1234168
DrugBankDB03977
ZINCZINC000001529747
PDB chain4yhy Chain H Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4yhy Antigen clasping by two antigen-binding sites of an exceptionally specific antibody for histone methylation.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		W33 E99 W106
Binding residue
(residue number reindexed from 1)		W33 E99 W106
Annotation score1
External links