Structure of PDB 4ud9 Chain H Binding Site BS01
Receptor Information
>4ud9 Chain H (length=254) Species:
9606
(Homo sapiens) [
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IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW
DKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI
ALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTA
GQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGD
SGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVI
DQFG
Ligand information
>4ud9 Chain I (length=12) Species:
6421
(Hirudo medicinalis) [
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GDFEEIPEEYLQ
Receptor-Ligand Complex Structure
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PDB
4ud9
Fragments Can Bind Either More Enthalpy or Entropy-Driven: Crystal Structures and Residual Hydration Pattern Suggest Why.
Resolution
1.124 Å
Binding residue
(original residue number in PDB)
F34 L40 L65 R67 R73 T74 R75 Y76 K81 I82 G246
Binding residue
(residue number reindexed from 1)
F19 L26 L60 R62 R68 T69 R70 Y71 K77 I78 G254
Enzymatic activity
Enzyme Commision number
3.4.21.5
: thrombin.
Gene Ontology
Molecular Function
GO:0004252
serine-type endopeptidase activity
GO:0005509
calcium ion binding
Biological Process
GO:0006508
proteolysis
GO:0007596
blood coagulation
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Molecular Function
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Biological Process
External links
PDB
RCSB:4ud9
,
PDBe:4ud9
,
PDBj:4ud9
PDBsum
4ud9
PubMed
26270568
UniProt
P00734
|THRB_HUMAN Prothrombin (Gene Name=F2)
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