Structure of PDB 4s1f Chain H Binding Site BS01
Receptor Information
>4s1f Chain H (length=220) Species:
83333
(Escherichia coli K-12) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLPQLHEAM
GGQGRLFAQVMATTAEGMVNDALKLRSIIADIVVKVPVTAEGLAAIKMLK
AEGIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLH
QLLKMHAPQAKVLAASFKTPRQALDCLLAGCESITLPLDVAQQMISYPAV
DAAVAKFEQDWQGAFGRTSI
Ligand information
Ligand ID
P2D
InChI
InChI=1S/C5H8O2/c1-4(6)3-5(2)7/h3H2,1-2H3
InChIKey
YRKCREAYFQTBPV-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.385
CC(=O)CC(C)=O
OpenEye OEToolkits 1.7.6
CC(=O)CC(=O)C
ACDLabs 12.01
O=C(C)CC(=O)C
Formula
C5 H8 O2
Name
pentane-2,4-dione
ChEMBL
CHEMBL191625
DrugBank
ZINC
ZINC000004720638
PDB chain
4s1f Chain H Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4s1f
Acid Base Catalyst Discriminates between a Fructose 6-Phosphate Aldolase and a Transaldolase
Resolution
2.242 Å
Binding residue
(original residue number in PDB)
D6 N28 K85 T109 Y131
Binding residue
(residue number reindexed from 1)
D6 N28 K85 T109 Y131
Annotation score
1
Enzymatic activity
Enzyme Commision number
4.1.2.-
Gene Ontology
Molecular Function
GO:0016829
lyase activity
GO:0016832
aldehyde-lyase activity
GO:0042802
identical protein binding
GO:0097023
fructose 6-phosphate aldolase activity
Biological Process
GO:0005975
carbohydrate metabolic process
GO:0006000
fructose metabolic process
GO:0042182
ketone catabolic process
Cellular Component
GO:0005737
cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4s1f
,
PDBe:4s1f
,
PDBj:4s1f
PDBsum
4s1f
PubMed
UniProt
P78055
|FSAA_ECOLI Fructose-6-phosphate aldolase 1 (Gene Name=fsaA)
[
Back to BioLiP
]