Structure of PDB 3d29 Chain H Binding Site BS01
Receptor Information
>3d29 Chain H (length=222) Species:
4932
(Saccharomyces cerevisiae) [
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TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAA
DTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIV
AGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEE
AIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVREEKQ
KSYKFPRGTTAVLKESIVNICD
Ligand information
Ligand ID
FEB
InChI
InChI=1S/C27H51N5O7/c1-4-5-6-7-8-9-10-11-20(34)15-25(37)31-22(16-24(29)36)27(39)32-21(12-13-23(28)35)26(38)30-19(17-33)14-18(2)3/h18-22,33-34H,4-17H2,1-3H3,(H2,28,35)(H2,29,36)(H,30,38)(H,31,37)(H,32,39)/t19-,20+,21-,22-/m0/s1
InChIKey
QHOKNKNDLHIBEV-LRSLUSHPSA-N
SMILES
Software
SMILES
CACTVS 3.341
CCCCCCCCC[C@@H](O)CC(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@H](CO)CC(C)C
ACDLabs 10.04
O=C(NC(CC(C)C)CO)C(NC(=O)C(NC(=O)CC(O)CCCCCCCCC)CC(=O)N)CCC(=O)N
CACTVS 3.341
CCCCCCCCC[CH](O)CC(=O)N[CH](CC(N)=O)C(=O)N[CH](CCC(N)=O)C(=O)N[CH](CO)CC(C)C
OpenEye OEToolkits 1.5.0
CCCCCCCCCC(CC(=O)NC(CC(=O)N)C(=O)NC(CCC(=O)N)C(=O)NC(CC(C)C)CO)O
OpenEye OEToolkits 1.5.0
CCCCCCCCC[C@H](CC(=O)N[C@@H](CC(=O)N)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CC(C)C)CO)O
Formula
C27 H51 N5 O7
Name
N~2~-[(3R)-3-hydroxydodecanoyl]-L-asparaginyl-N~1~-[(1S)-1-(hydroxymethyl)-3-methylbutyl]-L-glutamamide;
Fellutamide B, bound form
ChEMBL
DrugBank
ZINC
ZINC000058638640
PDB chain
3d29 Chain H Residue 0 [
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Receptor-Ligand Complex Structure
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PDB
3d29
Proteasome Inhibition by Fellutamide B Induces Nerve Growth Factor Synthesis
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
T1 S20 T21 Q22 G47 T48 A49
Binding residue
(residue number reindexed from 1)
T1 S20 T21 Q22 G47 T48 A49
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
T1 D17 R19 K33 G47 S129 D166 S169
Catalytic site (residue number reindexed from 1)
T1 D17 R19 K33 G47 S129 D166 S169
Enzyme Commision number
3.4.25.1
: proteasome endopeptidase complex.
Gene Ontology
Molecular Function
GO:0004298
threonine-type endopeptidase activity
Biological Process
GO:0051603
proteolysis involved in protein catabolic process
Cellular Component
GO:0005839
proteasome core complex
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:3d29
,
PDBe:3d29
,
PDBj:3d29
PDBsum
3d29
PubMed
18482702
UniProt
P25043
|PSB2_YEAST Proteasome subunit beta type-2 (Gene Name=PUP1)
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