Structure of PDB 1n7m Chain H Binding Site BS01
Receptor Information
>1n7m Chain H (length=213) Species:
10090
(Mus musculus) [
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ELVMTQTPKFMSTSVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYS
ASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPLTFGG
GTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNRGE
Ligand information
Ligand ID
MMP
InChI
InChI=1S/C35H40N4O4/c1-8-22-18(3)28-17-33-23(9-2)21(6)32(39(33)7)16-27-20(5)25(11-13-35(42)43)31(38-27)15-30-24(10-12-34(40)41)19(4)26(36-30)14-29(22)37-28/h14-17,36H,8-13H2,1-7H3,(H,40,41)(H,42,43)/b26-14-,27-16-,28-17-,29-14-,30-15-,31-15-,32-16-,33-17-
InChIKey
YNWHQWMCLCANDI-YIYRCNGCSA-N
SMILES
Software
SMILES
CACTVS 3.341
CCc1c(C)c2cc3n(C)c(cc4nc(cc5[nH]c(cc1n2)c(C)c5CCC(O)=O)c(CCC(O)=O)c4C)c(C)c3CC
ACDLabs 10.04
O=C(O)CCc3c(c4cc1nc(C(=C1CC)C)cc5n(c(cc2nc(C(=C2C)CCC(=O)O)cc3n4)c(c5CC)C)C)C
OpenEye OEToolkits 1.5.0
CCc1c(c2cc3nc(cc4c(c(c([nH]4)cc5nc(cc1n2C)C(=C5CC)C)C)CCC(=O)O)C(=C3C)CCC(=O)O)C
OpenEye OEToolkits 1.5.0
CCc1c(c2cc3nc(\cc/4\c(c(/c(/[nH]4)c/c5n/c(c\c1n2C)/C(=C5CC)C)C)CCC(=O)O)C(=C3C)CCC(=O)O)C
Formula
C35 H40 N4 O4
Name
N-METHYLMESOPORPHYRIN
ChEMBL
DrugBank
ZINC
PDB chain
1n7m Chain L Residue 600 [
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Receptor-Ligand Complex Structure
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PDB
1n7m
Structural evidence for substrate strain in antibody catalysis
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
Y49 Y55 Y91
Binding residue
(residue number reindexed from 1)
Y49 Y55 Y91
Annotation score
4
External links
PDB
RCSB:1n7m
,
PDBe:1n7m
,
PDBj:1n7m
PDBsum
1n7m
PubMed
12552112
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