Structure of PDB 1lod Chain H Binding Site BS01

Receptor Information
>1lod Chain H (length=47) Species: 3858 (Lathyrus ochrus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TSYTLNEVVPLKEFVPEWVRIGFSATTGAEFAAHEVLSWYFHSELAG
Ligand information
Ligand IDMUR
InChIInChI=1S/C9H17NO7/c1-3(8(13)14)16-7-5(10)9(15)17-4(2-11)6(7)12/h3-7,9,11-12,15H,2,10H2,1H3,(H,13,14)/t3-,4-,5-,6-,7-,9-/m1/s1
InChIKeyMSFSPUZXLOGKHJ-KTZFPWNASA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CC(C(=O)O)OC1C(C(OC(C1O)CO)O)N
OpenEye OEToolkits 1.5.0C[C@H](C(=O)O)O[C@@H]1[C@H]([C@@H](O[C@@H]([C@H]1O)CO)O)N
CACTVS 3.341C[C@@H](O[C@@H]1[C@@H](N)[C@H](O)O[C@H](CO)[C@H]1O)C(O)=O
CACTVS 3.341C[CH](O[CH]1[CH](N)[CH](O)O[CH](CO)[CH]1O)C(O)=O
ACDLabs 10.04O=C(O)C(OC1C(O)C(OC(O)C1N)CO)C
FormulaC9 H17 N O7
Namebeta-muramic acid;
muramic acid
ChEMBL
DrugBank
ZINCZINC000004097160
PDB chain1lod Chain G Residue 920 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1lod Interaction of a legume lectin with two components of the bacterial cell wall. A crystallographic study.
Resolution2.05 Å
Binding residue
(original residue number in PDB)		G29 A30 E31
Binding residue
(residue number reindexed from 1)		G28 A29 E30
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:1lod, PDBe:1lod, PDBj:1lod
PDBsum1lod
PubMed8144527
UniProtP12306|LEC1_LATOC Mannose/glucose-specific lectin alpha 1 chain

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