Structure of PDB 1kbg Chain H Binding Site BS01

Receptor Information
>1kbg Chain H (length=274) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPHSLRYFVTAVSRPGLGEPRYMEVGYVDDTEFVRFDSDAENPRYEPRAR
WMEQEGPEYWERETQKAKGNEQSFRVDLRTLLGYYNQSKGGSHTIQVISG
CEVGSDGRLLRGYQQYAYDGCDYIALNEDLKTWTAADMAALITKHKWEQA
GEAERLRAYLEGTCVEWLRRYLKNGNATLLRTDSPKAHVTHHSRPEDKVT
LRCWALGFYPADITLTWQLNGEELIQDMELVETRPAGDGTFQKWASVVVP
LGKEQYYTCHVYHQGLPEPLTLRW
Ligand information
>1kbg Chain P (length=8) Species: 11278 (Vesicular stomatitis Indiana virus strain Glasgow) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
RGYVYMGL
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1kbg Crystal structure of an MHC class I presented glycopeptide that generates carbohydrate-specific CTL.
Resolution2.2 Å
Binding residue
(original residue number in PDB)		Y7 V9 R62 E63 K66 N70 F74 D77 Y84 Y116 T143 W147 E152 R155 L156 Y159 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 V9 R62 E63 K66 N70 F74 D77 Y84 Y116 T143 W147 E152 R155 L156 Y159 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1kbg, PDBe:1kbg, PDBj:1kbg
PDBsum1kbg
PubMed10023770
UniProtP01901|HA1B_MOUSE H-2 class I histocompatibility antigen, K-B alpha chain (Gene Name=H2-K1)

[Back to BioLiP]