Structure of PDB 4v8p Chain GV Binding Site BS01

Receptor Information
>4v8p Chain GV (length=234) Species: 5911 (Tetrahymena thermophila) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PENVQKKLARDEKLRKAKAEQRKASSAQMKQRKAEWISKAQKYAAEYEAA
EKKIVDEKRKARKTGAFYVPAEAKVAFAIRIRGVNQLHPDVKRVLRLFRL
RQLHNGAFFRVNKASLNMIKRVLPFITFGYPTRNTISKLIYKRGFAKVNG
QRIPLTDNTIVEKSLGKFGITCVEDLIHEITTVGPHFKEANNFLWPFKLD
TPRGGFRNKRHAYHQGGDWGNREVYINDLVKAML
Ligand information
>4v8p Chain G3 (length=120) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guugucggccauacuaaggugaaaacaccggaucccauucgaacuccgaa
guuaagcgccuuaaggcuggguuaguacuaaggugggggaccgcuuggga
agucccagugucgauagccu
<<<<<<<<.....<<<<<<<......<<<<<<............>>>>..
>>.....>>>>>.>><<<<<<......<<<<<..<<....>>.>>>>>..
...>>>>>>.>>>>>>>>..
Receptor-Ligand Complex Structure
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PDB4v8p Crystal Structure of the Eukaryotic 60S Ribosomal Subunit in Complex with Initiation Factor 6.
Resolution3.52 Å
Binding residue
(original residue number in PDB)		R215 H216 H219 Q220 W224
Binding residue
(residue number reindexed from 1)		R210 H211 H214 Q215 W219
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:4v8p, PDBe:4v8p, PDBj:4v8p
PDBsum4v8p
PubMed22052974
UniProtP0DJ13|RL7_TETTH Large ribosomal subunit protein uL30 (Gene Name=RPL7)

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