Structure of PDB 8j2s Chain G Binding Site BS01
Receptor Information
>8j2s Chain G (length=460) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SQLHVAIVSSPGMGHLIPVLVLGNRLATHHNIKITILAITTTSSSAETEF
LKKTTLTNEEKTIEIIPVPSVDISHLINSSTKIFTQLRLLVREALPKIHS
TIASMTHRPDALIVDIFCTQILPIAEEFNISKYTYHPTTAWTLALAIYCQ
VFDKEIEGEYVELKEPLKIPGCKALRPDDVVDPLLDRSDQQYEEYVKLGK
EYTDFDGILINTWEDLEPETINALRYNEKLRLLLKVPVFPIGPLRRKVET
TLNDEVIQWLDKQNNESVLFVSFGSGGTLSTKQMTELAWGLELSQQKFVW
VVRPPSDTRDMSEYLPEGFLTRTKDMGLVVPMWANQVEILSHSSVGGFLT
HCGWNSTVESLTNGVPMIAWPLHAEQKMNAAMLTEELGVAIRPAVLPTKK
LVKREEIQGMVRILMQTKEGKRIKEKAKKLKKSAENALSDGGSSYNSICE
LVKDIRSREL
Ligand information
Ligand ID
U2F
InChI
InChI=1S/C15H23FN2O16P2/c16-8-11(23)9(21)5(3-19)32-14(8)33-36(28,29)34-35(26,27)30-4-6-10(22)12(24)13(31-6)18-2-1-7(20)17-15(18)25/h1-2,5-6,8-14,19,21-24H,3-4H2,(H,26,27)(H,28,29)(H,17,20,25)/t5-,6-,8-,9-,10-,11-,12-,13-,14-/m1/s1
InChIKey
NGTCPFGWXMBZEP-NQQHDEILSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=P(OC1OC(C(O)C(O)C1F)CO)(O)OP(=O)(O)OCC3OC(N2C=CC(=O)NC2=O)C(O)C3O
OpenEye OEToolkits 1.5.0
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OC3C(C(C(C(O3)CO)O)O)F)O)O
CACTVS 3.341
OC[C@H]1O[C@H](O[P@](O)(=O)O[P@@](O)(=O)OC[C@H]2O[C@H]([C@H](O)[C@@H]2O)N3C=CC(=O)NC3=O)[C@H](F)[C@@H](O)[C@@H]1O
OpenEye OEToolkits 1.5.0
C1=CN(C(=O)NC1=O)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)O[P@](=O)(O)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)F)O)O
CACTVS 3.341
OC[CH]1O[CH](O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)[CH](F)[CH](O)[CH]1O
Formula
C15 H23 F N2 O16 P2
Name
URIDINE-5'-DIPHOSPHATE-2-DEOXY-2-FLUORO-ALPHA-D-GLUCOSE
ChEMBL
CHEMBL593830
DrugBank
DB03488
ZINC
ZINC000016051573
PDB chain
8j2s Chain G Residue 501 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8j2s
Glucosyl transferase NbUGT72AY1 co-crystallized with Scopoletin, UDP-2F Glucose and Retinol
Resolution
Å
Binding residue
(original residue number in PDB)
G17 H18 R249 G277 S278 W350 A351 Q353 H368 G370 N372 S373 E376
Binding residue
(residue number reindexed from 1)
G14 H15 R246 G274 S275 W333 A334 Q336 H351 G353 N355 S356 E359
Annotation score
1
Enzymatic activity
Enzyme Commision number
2.4.1.-
External links
PDB
RCSB:8j2s
,
PDBe:8j2s
,
PDBj:8j2s
PDBsum
8j2s
PubMed
[
Back to BioLiP
]