Structure of PDB 8i34 Chain G Binding Site BS01

Receptor Information
>8i34 Chain G (length=175) Species: 34490 (Haliclona sp.) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VPTCKETPPQWSGDLFDWTIGVGAKIVLRIATVNYDRDSESIKITDVDRN
PGPKQTELLLYKSNTRYLVVGSDCTKGTTQGEFPSFGAHEGSQRDGNLIL
GAQPPNPGVGVDIFEGSTEREAFYGEYIPIGEGKQCVPAIESTASLLPLA
LRTAQYGNITTTLPTDPFSIPPECT
Ligand information
Ligand IDO1U
InChIInChI=1S/C40H54O4/c1-28(17-13-18-30(3)21-22-35-32(5)23-33(41)25-38(35,6)7)15-11-12-16-29(2)19-14-20-31(4)36(43)24-37(44)40(10)27-34(42)26-39(40,8)9/h11-20,24,33-34,41-43H,23,25-27H2,1-10H3/b12-11+,17-13+,19-14+,28-15+,29-16+,30-18+,31-20+,36-24-/t33-,34+,40+/m1/s1
InChIKeyWSLGBPCJDUQFND-BBPSKTQQSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CC(=CC=CC=C(C)C=CC=C(C)C(O)=CC(=O)[C]1(C)C[CH](O)CC1(C)C)C=CC=C(C)C#CC2=C(C)C[CH](O)CC2(C)C
CACTVS 3.385CC(=C/C=C/C=C(C)/C=C/C=C(C)/C(O)=C/C(=O)[C@]1(C)C[C@@H](O)CC1(C)C)\C=C\C=C(C)\C#CC2=C(C)C[C@@H](O)CC2(C)C
OpenEye OEToolkits 2.0.7CC1=C(C(CC(C1)O)(C)C)C#CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C(=CC(=O)C2(CC(CC2(C)C)O)C)O)C)C
OpenEye OEToolkits 2.0.7CC1=C(C(C[C@@H](C1)O)(C)C)C#C/C(=C/C=C/C(=C/C=C/C=C(\C)/C=C/C=C(\C)/C(=C/C(=O)[C@@]2(C[C@H](CC2(C)C)O)C)/O)/C)/C
FormulaC40 H54 O4
Name(2~{Z},4~{E},6~{E},8~{E},10~{E},12~{E},14~{E},16~{E})-4,8,13,17-tetramethyl-3-oxidanyl-19-[(4~{R})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]-1-[(1~{R},4~{S})-1,2,2-trimethyl-4-oxidanyl-cyclopentyl]nonadeca-2,4,6,8,10,12,14,16-octaen-18-yn-1-one;
mytiloxanthin
ChEMBL
DrugBank
ZINCZINC000100781326
PDB chain8i34 Chain G Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8i34 An ependymin-related blue carotenoprotein decorates marine blue sponge.
Resolution2.44 Å
Binding residue
(original residue number in PDB)
W34 L44 G132 S133 A138 Y140 R168
Binding residue
(residue number reindexed from 1)
W18 L28 G116 S117 A122 Y124 R152
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007160 cell-matrix adhesion
Cellular Component
GO:0005576 extracellular region

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8i34, PDBe:8i34, PDBj:8i34
PDBsum8i34
PubMed37517696
UniProtA0AA52HX42

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