Structure of PDB 8g8b Chain G Binding Site BS01

Receptor Information
>8g8b Chain G (length=108) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTA
EILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGRVTIAQGGVLPN
IQSVLLPK
Ligand information
>8g8b Chain I (length=168) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
atgcacacatgctaatatatgcacacaatgcacacaggttaatatataca
catacacacacatgcacacacacgtgcacacatatatgcacatgcatgca
cacacgtatatgcacacacatgcacatgcatgcgcacatagtcacacaca
tgcacacattagcatatg
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8g8b Histone modifications regulate pioneer transcription factor cooperativity.
Resolution4.3 Å
Binding residue
(original residue number in PDB)		R11 K13 R29 R42 V43 G44 A45 T76 R77
Binding residue
(residue number reindexed from 1)		R1 K3 R19 R32 V33 G34 A35 T66 R67
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:8g8b, PDBe:8g8b, PDBj:8g8b
PDBsum8g8b
PubMed37225990
UniProtQ6AZJ8

[Back to BioLiP]