Structure of PDB 7r6k Chain G Binding Site BS01

Receptor Information

>7r6k Chain G (length=52) Species: 1247190 (Saccharomyces cerevisiae BY4741) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

LSRYVKWPEYVRVQRQKKILSIRLKVPPTIAQFQKHWGGGILGNKAQAKM
DK

Ligand information

>7r6k Chain 1 (length=152) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

gcugaacuuaagcauaaagcggagucgaguuguuugcagcucuaagcuac
ggugaucgucgaaggggcgaaagacaagauggggaagcuccguuucaaug
uugagcuugacucuaguuguggggaguaaaguuaccacaucgugagacag
gu

<<<.....<......>.>>>......<<<<<<<..>>>>>>>.....<.<
<<...>>>.....>...<....>........<<<....>>>.......<<
<.<<<<<<..<<<<.<...>..>>>>..>>>>>.>.>>><<....>>...
..

Receptor-Ligand Complex Structure

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Structure summary

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PDB	7r6k Sequence-specific remodeling of a topologically complex RNP substrate by Spb4.
Resolution	3.17 Å
Binding residue (original residue number in PDB)	Y49 P53 E54 Y55 R57
Binding residue (residue number reindexed from 1)	Y4 P8 E9 Y10 R12

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0003723	RNA binding
GO:0003735	structural constituent of ribosome

	Biological Process
GO:0000470	maturation of LSU-rRNA
GO:0002181	cytoplasmic translation
GO:0006364	rRNA processing
GO:0042254	ribosome biogenesis

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

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Cellular Component

External links

PDB	RCSB:7r6k, PDBe:7r6k, PDBj:7r6k
PDBsum	7r6k
PubMed	36482249
UniProt	P17076\|RL8A_YEAST Large ribosomal subunit protein eL8A (Gene Name=RPL8A)

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