Structure of PDB 7q5n Chain G Binding Site BS01

Receptor Information
>7q5n Chain G (length=103) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EEIPITVDFSGGLEMLFDNQRRHSISLPAKDTEGKPVTIAFLIDYISKKL
MKDPRTDLFVLDNHIRPGILVLINDADWELEGEEAYEIQPNDNILFVSTL
HGG
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain7q5n Chain G Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB7q5n E2/E3-independent ubiquitin-like protein conjugation by Urm1 is directly coupled to cysteine persulfidation.
Resolution2.5 Å
Binding residue
(original residue number in PDB)
H72 E92
Binding residue
(residue number reindexed from 1)
H64 E84
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0031386 protein tag activity
GO:0046872 metal ion binding
Biological Process
GO:0002098 tRNA wobble uridine modification
GO:0008033 tRNA processing
GO:0032447 protein urmylation
GO:0034227 tRNA thio-modification
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol

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Molecular Function

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Cellular Component
External links
PDB RCSB:7q5n, PDBe:7q5n, PDBj:7q5n
PDBsum7q5n
PubMed36102610
UniProtG0SE11

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