Structure of PDB 6k0b Chain G Binding Site BS01
Receptor Information
>6k0b Chain G (length=120) Species:
243232
(Methanocaldococcus jannaschii DSM 2661) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KKFLEKKLKKIAYERIDILMSLAEEEAKKGNWDRAKRYVYLARRIAMKMR
IRFPKKWKRRICKKCGTFLLYGRNARVRIKSKRYPHVVITCLECGAIYRI
PMIREKKEKRRKKLEERLKA
Ligand information
>6k0b Chain U (length=83) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggugggguucccgagcggccaaagggagcagacucuaaaucugccgucau
cgacuucgaagguucgaauccuucccccaccac
<<<<<<<..<<<...........>>>.<<<<<.......>>>>>.<<<..
.>>>...<<<<<.......>>>>>>>>>>>>..
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6k0b
Cryo-electron microscopy structure of an archaeal ribonuclease P holoenzyme.
Resolution
4.3 Å
Binding residue
(original residue number in PDB)
K8 K10 M48 K49 R51
Binding residue
(residue number reindexed from 1)
K7 K9 M47 K48 R50
Enzymatic activity
Enzyme Commision number
3.1.26.5
: ribonuclease P.
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
GO:0004526
ribonuclease P activity
GO:0008270
zinc ion binding
GO:0046872
metal ion binding
Biological Process
GO:0001682
tRNA 5'-leader removal
GO:0006396
RNA processing
GO:0008033
tRNA processing
Cellular Component
GO:0005737
cytoplasm
GO:0030677
ribonuclease P complex
GO:1902555
endoribonuclease complex
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:6k0b
,
PDBe:6k0b
,
PDBj:6k0b
PDBsum
6k0b
PubMed
31197137
UniProt
Q58372
|RNP4_METJA Ribonuclease P protein component 4 (Gene Name=rnp4)
[
Back to BioLiP
]