Structure of PDB 6d9j Chain G Binding Site BS01 |
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>6d9j Chain 5 (length=3594)
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cgcgaccucagaucagacguggcgacccgcugaauuuaagcauauuaguc agcggaggaaaagaaacuaaccaggauucccucaguaacggcgagugaac agggaagagcccagcgccgaauccccgccccgcggcggggcgcgggaaau guggcguacggaagacccacuccccggcgccggggggcccaaguccuucu gaucgaggcccagcccguggacggugugaggccgguagcggcccccggcg cgccgggcccgggucuucccggagucggguugcuugggaaugcagcccaa agcgggugguaaacuccaucuaaggcuaaauaccggcacgagaccgauag ucaacaaguaccguaagggaaaguugaaaagaacuuugaagagagaguuc aagagggcgugaaaccguuaagagguaaacgggugggguccgcgcagucc gcccggaggauucaacccggcggcggguccggccgugccggcggggcgga ucucccgcucccgucggcgggggaccgccccccggccggcgaccggccgc cgccgggcgcauuuccaccgcggcggugcgccgcgaccggcuccgggacg gcugggaaggcccggcggggaagguggcccgggggccccggguguuacag cccgccccggcagcagcagcucgccgaaucccggggccgagggagcgaga cccgugcgccgcgcucuccccccucgggggggccgggccaccccucccac ggcgcgaccgcuggggcggacuguccagugcgccccgggcgggucgcgcc gucgggcccggggggccacgcgucccccgcgagcgcacggggucggcggc gaugucggcuacccacccgacccgucuugaaacacggaccaaggagucua acacgugcgcgagucgggggcuacgaaagccgccguggcgcaaugaaggu gaaggccggcgccgccggccgaggugggaucccgaggccuuccaguccgc cgagggcgcaccaccggcccgucucgcccgccgcgccggggagguggagc acgagcgcacguguuaggacccgaaagauggugaacuaugccugggcagg gcgaagccagaggaaacucugguggagguccguagcgguccugacgugcg aaucggucguccgaccuggguauaggggcgaaagacuaaucgaaccaucu aguagcugguucccuccaaaguuucccucaggauagcuggcgcucuccgc aguuuuauccgguaaagcgaaugauuagaggucuuggggccgaaacgauc ucaaccuauucucaaacuuuaaauggguaagaagcccggcucgcuggugu ggagccgggcguggaaugcgagugccuagugggccacuuuugguaagcag aacuggcgcugcgggaugaaccgaacgccggguuaaggcgcccgaugccg acgcucaucagaccccagaaaagguguugguugauauagacagcaggaug guggccauggaagucggaauccgcuaaggaguguguaacaacucaccugc cgaaucaacuagcccugaaaauggauggcgcuggagcgucgggcccauac ccggccgucgcuggcagucggcagagcgagaaagagaguggcgcggacgc uacgccgcgacgaguaggagggccgcugcggugagccuugaagccuaggg cgcgggcccggguggagccgccgcaggugcagaucuuggugguaguagca aauauucaaacgagaacuuugaaggccgaaguggagaaggguuccaugug aacagcaguugaacaugggucagucgguccugagagaugggcgagcgccg uuccgaagggacgggcgauggccuccguugcccucagccgaucgaaaggg agucggguucagauccccgaauccggaguggcggagaugggcgccgcgag gcguccagugcgguaacgcgaccgaucccggagaagccggcgggagcccc ggggagaguucucuuuucuuugugaagggcagggcgcccuggaauggguu cgccccgagagaggggcccgugccuuggaaagcgucgcgguuccggcggc guccggugagcucucgcuggcccuugaaaauccgggggagaggguguaaa ucucgcgccgggccguacccauauccgcagcaggucuccaaggugaacag ccucuggcauguuggaacaauguagguaagggaagucggcaagccggauc cguaacuucgggauaaggauuggcucuaagggcuggcagccgacuuagaa cuggugcggaccaggggaauccgacuguuuaauuaaaacaaagcaucgcg aaggcccgcggcggguguugacgcgaugugauuucugcccagugcucuga augucaaagugaagaaauucaaugaagcgcggguaaacggcgggaguaac uaugacucucuuaagguagccaaaugccucgucaucuaauuagugacgcg caugaauggaugaacgagauucccacugucccuaccuacuauccagcgaa accacagccaagggaacgggcuuggcggaaucagcggggaaagaagaccc uguugagcuugacucuagucuggcacggugaagagacaugagagguguag aauaagugggaggcccgggccgccggugaauaccacuacucugaucguuu uuucacugacccggugaggcgggggggcgagccgggcucucgcuucuggc gccaagcgcccggccggccgggcgcgacccgcuccggggacagugccagg uggggaguuugacuggggcgguacaccugucaaacgguaacgcagguguc cuaaggcgagcucagggaggacagaaaccucccguggagcagaagggcaa aagcucgcuugaucuugauuuucaguacgaauacagaccgugaaagcggg gccucacgauccuucugaccuuuuggguuuuaagcaggaggugucagaaa aguuaccacagggauaacuggcuuguggcggccaagcguucauagcgacg ucgcuuuuugauccuucgaugucggcucuuccuaucauugugaagcagaa uucaccaagcguuggauuguucacccacuaauagggaacgugagcugggu uuagaccgucgugagacagguuaguuuuacccuacugaugauguguuguu gccaugguaauccugcucaguacgagaggaaccgcagguucagacauuug guguaugugcuuggcugaggagccaauggggcgaagcuaccaucuguggg auuaugacugaacgccucuaagucagaaucccgcccaggcggaacgauag cgccggagccucgguuggccucggauagccggucccccgccgggguccgg ugcggagagcccuucgucccgggaaacggggcggccggaaagggggccgc ccucucgcccgucacgcaccgcacguucguggggaaccuggcgcuaaacc auucguagacgaccugcuucugggucgggguuucguacguagcagagcag cugcugcgaucuauugaaagucagcccucgacacaaggguuugu |
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PDB | 6d9j Dual tRNA mimicry in the Cricket Paralysis Virus IRES uncovers an unexpected similarity with the Hepatitis C Virus IRES. |
Resolution | 3.2 Å |
Binding residue (original residue number in PDB) | K87 R88 K90 N91 F92 I94 I98 P100 K101 R102 R106 F107 K109 R112 Y113 R115 K125 R126 L127 K160 Q161 K163 R166 R185 P186 G192 V193 N194 T195 R249 K250 T253 L295 P297 K298 S299 R302 |
Binding residue (residue number reindexed from 1) | K8 R9 K11 N12 F13 I15 I19 P21 K22 R23 R27 F28 K30 R33 Y34 R36 K46 R47 L48 K81 Q82 K84 R87 R99 P100 G106 V107 N108 T109 R163 K164 T167 L209 P211 K212 S213 R216 |
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Enzyme Commision number |
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