Structure of PDB 5te4 Chain G Binding Site BS01

Receptor Information
>5te4 Chain G (length=341) Species: 11676 (Human immunodeficiency virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WEDADTTLFCASDAKAYSTEKHNVWATHACVPTDPDPQEIPLENVTENFN
MWKNNMVEQMHEDIISLWDESLKPCVMLTGGSTIKQACPKVTFEPIPIHY
CAPAGFAILKCRDEDFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAK
GDIVIRSENLTNNAKVIIVQLNEPVQIVCIRPDIRQAHCNVTRGKWVNIT
KNVKEQLWKIFNKTTNITFNNTIFNSPAGGDLEITTHSFNCGGEFFYCNT
SDLFNETNNENITLQCRIKQIVRMWQRVGQAMYAPPIAGNITCISNITGL
LLTRDGVNDTHDKENETFRPTGGDMRDNWRSELYKYKVIKL
Ligand information
Ligand IDBU3
InChIInChI=1S/C4H10O2/c1-3(5)4(2)6/h3-6H,1-2H3/t3-,4-/m1/s1
InChIKeyOWBTYPJTUOEWEK-QWWZWVQMSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C[C@H]([C@@H](C)O)O
CACTVS 3.341C[C@@H](O)[C@@H](C)O
ACDLabs 10.04OC(C)C(O)C
OpenEye OEToolkits 1.5.0CC(C(C)O)O
CACTVS 3.341C[CH](O)[CH](C)O
FormulaC4 H10 O2
Name(R,R)-2,3-BUTANEDIOL
ChEMBL
DrugBank
ZINCZINC000000901616
PDB chain5te4 Chain G Residue 515 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5te4 Identification of a CD4-Binding-Site Antibody to HIV that Evolved Near-Pan Neutralization Breadth.
Resolution2.75 Å
Binding residue
(original residue number in PDB)
S375 Y384 W427
Binding residue
(residue number reindexed from 1)
S238 Y247 W275
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:5te4, PDBe:5te4, PDBj:5te4
PDBsum5te4
PubMed27851912
UniProtC6ZIH2

[Back to BioLiP]