Structure of PDB 5ddo Chain G Binding Site BS01

Receptor Information
>5ddo Chain G (length=86) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RPNHTIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAF
VIFKEVSSATNALRSMQGFPFYDKPMRIQYAKTDSD
Ligand information
>5ddo Chain A (length=58) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cguuggcccaggaaacuggguaguaagguccauugcacuccgggccugaa
gcaacgcu
<<<<<<<<<<<....>>>>>>....<<<<<<..........>>>>>>...
.>>>>>..
Receptor-Ligand Complex Structure
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PDB5ddo Structural and Dynamic Basis for Low-Affinity, High-Selectivity Binding of L-Glutamine by the Glutamine Riboswitch.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		Y13 N15 N16 E19 K22 S48 L49 K50 M51 R52 Q54 F56 K80 Q85 T89 D90
Binding residue
(residue number reindexed from 1)		Y7 N9 N10 E13 K16 S42 L43 K44 M45 R46 Q48 F50 K74 Q79 T83 D84
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding

View graph for
Molecular Function
External links
PDB RCSB:5ddo, PDBe:5ddo, PDBj:5ddo
PDBsum5ddo
PubMed26655897
UniProtP09012|SNRPA_HUMAN U1 small nuclear ribonucleoprotein A (Gene Name=SNRPA)

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