Structure of PDB 5c8e Chain G Binding Site BS01
Receptor Information
>5c8e Chain G (length=280) Species:
262724
(Thermus thermophilus HB27) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
HMTSSGVYTIAEVEAMTGLSAEVLRQWERRYGFPKPRRTPGGHRLYSAED
VEALKTIKRWLEEGATPKAAIRRYLAQEVRPEDLGTGLLEALLRGDLAGA
EALFRRGLRFWGPEGVLEHLLLPVLREVGEAWHRGEIGVAEEHLASTFLR
ARLQELLDLAGFPPGPPVLVTTPPGERHEIGAMLAAYHLRRKGVPALYLG
PDTPLPDLRALARRLGAGAVVLSAVLSEPLRALPDGALKDLAPRVFLGGQ
GAGPEEARRLGAEYMEDLKGLAEALWLPRG
Ligand information
>5c8e Chain K (length=26) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ataggttttgtcaagcttttgtacat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5c8e
Structural basis for gene regulation by a B12-dependent photoreceptor.
Resolution
3.89 Å
Binding residue
(original residue number in PDB)
Q25 W26 R29 Y30 G40 H42 P66 K67
Binding residue
(residue number reindexed from 1)
Q26 W27 R30 Y31 G41 H43 P67 K68
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0031419
cobalamin binding
GO:0042802
identical protein binding
GO:0046872
metal ion binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5c8e
,
PDBe:5c8e
,
PDBj:5c8e
PDBsum
5c8e
PubMed
26416754
UniProt
Q746J7
[
Back to BioLiP
]