Structure of PDB 4u7b Chain G Binding Site BS01
Receptor Information
>4u7b Chain G (length=342) Species:
7226
(Drosophila mauritiana) [
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FVPNKEQTRTVLIFCFHLKKTAAESHRMLVEAFGEQVPTVKTCERWFQRF
KSGDFDVDDKEHGKPPKRYEDAELQALLDEDDAQTQKQLAEQLEVSQQAV
SNRLREMGKIQKVGRWVPHELNERQMERRKNTCEILLSRYKRKSFLHRIV
TGDEKWIFFVNPKRKKSYVDPGQPATSTARPNRFGKKTMLCVWWDQSGVI
YYELLKPGETVNAARYQQQLINLNRALQRKRPEYQKRQHRVIFLHANAPS
HTARAVRDTLETLNWEVLPHAAYSPDLAPSDYHLFASMGHALAEQRFDSY
ESVKKWLDEWFAAKDDEFYWRGIHKLPERWEKCVASDGKYFE
Ligand information
>4u7b Chain H (length=25) [
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ggtgtacaagtatgaaatgtcgttt
Receptor-Ligand Complex Structure
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PDB
4u7b
Structural role of the flanking DNA in mariner transposon excision.
Resolution
3.09 Å
Binding residue
(original residue number in PDB)
R12 T42 K44 T45 R48 W49 R52 D62 K63 G66 K67 P68 T88 Q89 Q100 Q101 S104 R108
Binding residue
(residue number reindexed from 1)
R9 T39 K41 T42 R45 W46 R49 D59 K60 G63 K64 P65 T85 Q86 Q97 Q98 S101 R105
Enzymatic activity
Enzyme Commision number
3.1.-.-
Gene Ontology
Molecular Function
GO:0000014
single-stranded DNA endodeoxyribonuclease activity
GO:0003676
nucleic acid binding
GO:0003677
DNA binding
GO:0003690
double-stranded DNA binding
GO:0003697
single-stranded DNA binding
GO:0004519
endonuclease activity
GO:0042800
histone H3K4 methyltransferase activity
GO:0044547
DNA topoisomerase binding
GO:0046872
metal ion binding
GO:0046975
histone H3K36 methyltransferase activity
Biological Process
GO:0000729
DNA double-strand break processing
GO:0006303
double-strand break repair via nonhomologous end joining
GO:0006310
DNA recombination
GO:0006338
chromatin remodeling
GO:0015074
DNA integration
GO:0031297
replication fork processing
GO:0044774
mitotic DNA integrity checkpoint signaling
Cellular Component
GO:0000793
condensed chromosome
GO:0005634
nucleus
GO:0035861
site of double-strand break
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:4u7b
,
PDBe:4u7b
,
PDBj:4u7b
PDBsum
4u7b
PubMed
25662605
UniProt
Q7JQ07
|MOS1T_DROMA Mariner Mos1 transposase (Gene Name=mariner\T)
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