Structure of PDB 3x1v Chain G Binding Site BS01
Receptor Information
>3x1v Chain G (length=109) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
RAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTA
EILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPN
IQAVLLPKK
Ligand information
>3x1v Chain I (length=146) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagctgaattcagctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3x1v
Structural and functional analyses of nucleosome complexes with mouse histone variants TH2a and TH2b, involved in reprogramming
Resolution
2.921 Å
Binding residue
(original residue number in PDB)
R11 R29 R42 G44 T76 R77
Binding residue
(residue number reindexed from 1)
R1 R19 R32 G34 T66 R67
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0006325
chromatin organization
GO:0008285
negative regulation of cell population proliferation
GO:0031507
heterochromatin formation
GO:0061644
protein localization to CENP-A containing chromatin
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
GO:0043505
CENP-A containing nucleosome
GO:0070062
extracellular exosome
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:3x1v
,
PDBe:3x1v
,
PDBj:3x1v
PDBsum
3x1v
PubMed
26188507
UniProt
P04908
|H2A1B_HUMAN Histone H2A type 1-B/E (Gene Name=H2AC4)
[
Back to BioLiP
]