Structure of PDB 2wcv Chain G Binding Site BS01

Receptor Information
>2wcv Chain G (length=140) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIRADGLLV
SDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCP
DIIRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP
Ligand information
Ligand IDFUC
InChIInChI=1S/C6H12O5/c1-2-3(7)4(8)5(9)6(10)11-2/h2-10H,1H3/t2-,3+,4+,5-,6+/m0/s1
InChIKeySHZGCJCMOBCMKK-SXUWKVJYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341C[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O
ACDLabs 10.04OC1C(O)C(OC(O)C1O)C
OpenEye OEToolkits 1.5.0CC1C(C(C(C(O1)O)O)O)O
OpenEye OEToolkits 1.5.0C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)O
CACTVS 3.341C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
FormulaC6 H12 O5
Namealpha-L-fucopyranose;
alpha-L-fucose;
6-deoxy-alpha-L-galactopyranose;
L-fucose;
fucose
ChEMBLCHEMBL1232862
DrugBankDB04473
ZINCZINC000001532814
PDB chain2wcv Chain G Residue 1141 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB2wcv Crystal Structures and Enzyme Mechanism of a Dual Fucose Mutarotase/Ribose Pyranase
Resolution1.9 Å
Binding residue
(original residue number in PDB)		D30 F33 M73 Y111 K128 Y129
Binding residue
(residue number reindexed from 1)		D30 F33 M73 Y111 K128 Y129
Annotation score5
Binding affinityMOAD: Kd=1.7mM
Enzymatic activity
Enzyme Commision number 5.1.3.29: L-fucose mutarotase.
5.4.99.62: D-ribose pyranase.
Gene Ontology
Molecular Function
GO:0016853 isomerase activity
GO:0016854 racemase and epimerase activity
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0036373 L-fucose mutarotase activity
GO:0042802 identical protein binding
GO:0042806 fucose binding
GO:0048029 monosaccharide binding
GO:0062193 D-ribose pyranase activity
Biological Process
GO:0005996 monosaccharide metabolic process
GO:0006004 fucose metabolic process
GO:0036065 fucosylation
GO:0042354 L-fucose metabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:2wcv, PDBe:2wcv, PDBj:2wcv
PDBsum2wcv
PubMed19524593
UniProtP0AEN8|FUCM_ECOLI L-fucose mutarotase (Gene Name=fucU)

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