Structure of PDB 1rqc Chain G Binding Site BS01

Receptor Information
>1rqc Chain G (length=171) Species: 5833 (Plasmodium falciparum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNI
SKRIIVWNALYEKRKEENERIFINPSIVEQSLVKLKLIEGCLSFPGIEGK
VERPSIVSISYYDINGYKHLKILKGIHSRIFQHEFDHLNGTLFIDKMTQV
DKKKVRPKLNELIRDYKATHS
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain1rqc Chain G Residue 361 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1rqc An improved crystal form of Plasmodium falciparum peptide deformylase
Resolution2.8 Å
Binding residue
(original residue number in PDB)		Q112 C156 H198 H202
Binding residue
(residue number reindexed from 1)		Q47 C91 H133 H137
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) G107 Q112 C156 L157 H198 E199 H202
Catalytic site (residue number reindexed from 1) G42 Q47 C91 L92 H133 E134 H137
Enzyme Commision number 3.5.1.88: peptide deformylase.
Gene Ontology
Molecular Function
GO:0042586 peptide deformylase activity

View graph for
Molecular Function
External links
PDB RCSB:1rqc, PDBe:1rqc, PDBj:1rqc
PDBsum1rqc
PubMed15010544
UniProtQ8I372

[Back to BioLiP]