Structure of PDB 1id3 Chain G Binding Site BS01
Receptor Information
>1id3 Chain G (length=108) Species:
4932
(Saccharomyces cerevisiae) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KASQSRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAE
ILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNI
HQNLLPKK
Ligand information
>1id3 Chain I (length=146) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
atcaatatccacctgcagattctaccaaaagtgtatttggaaactgctcc
atcaaaaggcatgttcagcggaattccgctgaacatgccttttgatggag
cagtttccaaatacacttttggtagaatctgcaggtggatattgat
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
1id3
Structure of the yeast nucleosome core particle reveals fundamental changes in internucleosome interactions.
Resolution
3.1 Å
Binding residue
(original residue number in PDB)
R43 G45 S46 K76 T77 R78
Binding residue
(residue number reindexed from 1)
R31 G33 S34 K64 T65 R66
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0005515
protein binding
GO:0030527
structural constituent of chromatin
GO:0031492
nucleosomal DNA binding
GO:0046982
protein heterodimerization activity
Biological Process
GO:0000122
negative regulation of transcription by RNA polymerase II
GO:0006281
DNA repair
GO:0006325
chromatin organization
GO:0031507
heterochromatin formation
Cellular Component
GO:0000786
nucleosome
GO:0005634
nucleus
GO:0005694
chromosome
GO:0031298
replication fork protection complex
GO:0032991
protein-containing complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:1id3
,
PDBe:1id3
,
PDBj:1id3
PDBsum
1id3
PubMed
11566884
UniProt
P04911
|H2A1_YEAST Histone H2A.1 (Gene Name=HTA1)
[
Back to BioLiP
]