Structure of PDB 6sga Chain Fd Binding Site BS01

Receptor Information

>6sga Chain Fd (length=96) Species: 5702 (Trypanosoma brucei brucei)

KASHIRIANRKRVEMFVAKRFHLPTRLATAAPDIAAEWHDELNPMHMYPA
IIGIGHVQPVWWKCAICSHSYQMSVEKRVVRGGGCPQCVVNGKRAV

Ligand information

>6sga Chain CA (length=463)

uaaauuauggucaauuguuaguauucauauuaauuuuuuuaaauguuuua
ucauuuuauaaagguuuauuuuugaaagauuuuuuguauaaaauuuuagg
aauaguuaauaauaauuuauaauuuugauuagauuguuuuguuaaugcua
uuagauggguguggaaaaauaaaaaaaauaauuaauauauaucaauaaua
aauuaaauuaaucuauuagucagaaauggaugccagccguugcgguaauu
ucuaugcuuuuaaauauuauacaauuaucauauuaaauuguuaagugcug
auuuaaccaauaaaaauauaaauaauuuuuauuuguuuuuaaacaccauu
agguauaugcaaauauaaaauuauaguaauuauagaaauuaaaaagcacc
aauuuuuauaauaaaaauaacgugcaguaauuaauauauuuauaaaaaua
uauuuuuuuuuuu

...........................<<<<......<<<........<.
..>..........<<<.............................<....
.<<...<<<.......>>>..>>........>........<<....>>..
...>>>...........................................>
>>.........................<<<..<<.........>>....>
>>..........>>>>.......<<.<<........<<<<..........
.......>>>>..................<<<<<<<........<<<...
.>>>....>>>>>>>....>>.>>....<<.......>>.......<<<.
...<<<<......>>>>....>>>........<<<<<<<<<....>>>>>
>>>>.........

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6sga Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery.
• Resolution: 3.1 Å
• Binding residue (original residue number in PDB): K21 A22 S23 H24 R32 E34 M35 F36 K39 R40
• Binding residue (residue number reindexed from 1): K1 A2 S3 H4 R12 E14 M15 F16 K19 R20

Gene Ontology

Cellular Component

• GO:0005739 mitochondrion
• GO:0020023 kinetoplast

External links

• PDB: RCSB:6sga, PDBe:6sga, PDBj:6sga
• PDBsum: 6sga
• PubMed: 31515389
• UniProt: Q581T4