Structure of PDB 7tbi Chain F1 Binding Site BS01

Receptor Information
>7tbi Chain F1 (length=1641) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TLTDRTYLPPLEDCLTGRTVILSWRLVASALEDADLARLTSPALSTFLRD
GFVHELLKHPARVFEPKDLKQEFETKTSSGVDTIKKDALWLADAVAINQV
AALRIVLIEYQTRAHSHLVLPLSTQDVANIQEAAGILSLLNPASAVDAET
MWCDFETEARRRERILATYLSERRSFTAAVDALVTFLLHSAPGQHKDLDS
LRRALLKDAFAFDEDLDVPDRSKLLTMAPTYMNLVEDCIARAQALPAKLG
ESFKTEAFELDWLRTAITEAVHSLSIAFQALDLDTPYFAPHELLSEWFEL
MNSSLFLESILGFEVVADLAMPARSLVSAICLKMLNIDRTIQFLHDFDYP
DGEEPYLLSSQTLNKIHTAVTNAVNSGVAASLPVAFAWSLIVHQMHLGYQ
ERASPYDDFLREQRLDNDIAPVEQIAMLATSRGQVYQVMSEMALCLGTTH
EAAFRPAVGARARLVFQDLLKRAAYLIPYQDEPVFSLLAILATGRQYWDV
TDALSASSLNQVYTDMLDDETLFTQFTMQAINRFPYEFNPFSVLCRVLAA
ALITNKDKADVVTGWLWRTPTLTVDWNPAWDRSYELCFEDENTNSFRLTR
DVDLFGERFIIPEGTLGRFVTTARLEFEHSALALLGKRLEVKAAEEICDS
GMAPLDVDEQAEAVAMLATVLRAESLKSTAKGGDPEAPLKFLKEASRLLP
HNKDILTVISDTIDGLVEKELLELDGPQIAVLASCLQFLHAALAVCPGRV
WAYMSRCALIAGDARPGRLSRITGSLDMYAERFDLLSSAVKLFAALIDSA
ACSAVPWLGTSEKILSRVALAIAQAALDVYESTTTWRFRSELDRSILVRD
VVGLMHKLVVHAHTLSSHLTSTLSPAAAHIISSFLTPPPSASSLRFQPLL
GTLLVALITPRATLYPGQSRILAERVTSVLAFCTSLLRAADFLGQTHIPL
QTHLFQSACLLARLPAANAVYRAPVLELLRALVEVAGRAEPPSLLGYLGS
HAARSFISLVEGIDKPFGRVEHAVVTWRFFAAVIRNRQQWMAGCLLTGRV
GEGSVLAAAMERLREVKSLDVQEAVAVMDFVVSAQNYWPWTIFAVRKEKE
VVDALRGYVRGLKAPGMVMKTDGAAAAAFQARIAAYVAETFAMQLYHMRQ
MRQAEKFAGELVADLDYFLREGVMVWGYNASLHGNFARNFAKRFPGVEVD
DFKRTMWLPRELGKGYYYALEVAEQMLGFDAGWGGVKQSGFRKEMETANL
NLSLVEAQVSLFHAWEYLLLELTLSLLPKKENAAFARQVLQVVEQCLEAN
QRSQPPENIFVVLGHARAGLALTLLQRLADANQLPRDVTHLLALVSSAIH
AVENPFGANDLPYFRTLLKILFVVLRAAKQGVAITQQVLTILDRVVARCF
RALAALVHTAPEDLALITAILQACLSVPGIEQCQVQVLNIMAAHDVFQVA
VALFSPVYGELALLFLLELSALPALAEHLACDGLLGHLAAARLAGYMRRT
NVGPFAENAGAARCYAIWAKCLLPLLLNILAALGSTVAPEVAWVLNQFPN
LLQSSVERIEPLLEISEIHSLALLTRVLAACRAQNARDVPEVTWDGAKVL
ECVEYWLKVLRERLVPLGPREVNRLEEKAVGLLVGVREVLE
Ligand information
>7tbi Chain H1 (length=13) Species: 4932 (Saccharomyces cerevisiae) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
EDSILQPGAFSAN
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7tbi Architecture of the linker-scaffold in the nuclear pore.
Resolution25.0 Å
Binding residue
(original residue number in PDB)		Y533 I535 Y537
Binding residue
(residue number reindexed from 1)		Y475 I477 Y479
Gene Ontology
--> -->
 
 
UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 13:24:49 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7tbi', asym_id = 'F1', bs = 'BS01', title = 'Architecture of the linker-scaffold in the nuclear pore.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7tbi', asym_id='F1', bs='BS01', title='Architecture of the linker-scaffold in the nuclear pore.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0017056', uniprot = '', pdbid = '7tbi', asym_id = 'F1'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0017056', uniprot='', pdbid='7tbi', asym_id='F1')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>