Structure of PDB 9cc8 Chain F Binding Site BS01
Receptor Information
>9cc8 Chain F (length=838) Species:
4100
(Nicotiana benthamiana) [
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IGSAKGELENLLKEVQHLKGFLDDAAKLPSDSEQWKVLVEEIQKTVHTAE
DAVDKFVVQAKLHKEKNKMARILDVGHLATVRNLAAEVKGIHDQVKELRL
NNQALQARPTLELPQQGPALEDDEVVGFDEEANKVINRLVKESKDLDIIP
VVGMPGLGKTTLARKIYKDPKLSYEFFGVHWVYVGQSYKIKDVFLNILKF
FTRRTEDYQHEDVDALAKVIAGFINKGGRCLICLDDVWETKVIDYVKTIF
PENEKGHRVMMTTRNKVLATYANSDPHDLKFLTPKESFELLVKRVFGKKP
CPKDLVGHGESIAGKCGGVPLAVVVIAGALRGRPNTSDWIRVERNVVQHL
YTNSEESCLKFVEMSYDHLPQEVQTCFLYCGVFPRGFDIPSWKVIRLWIA
EGLIKPQESYTLEEIAEFYLNDLVNRNLVILQQKRSDGQIKTCRLHVMLH
QFCKKEASNKWLFQEVSLTPDQAIDPNKSRRLCIQPSNLKDFLSKKPSAE
HVRSFYCFSSKEKQIRGLTPNDIKLIHKAFPLVRVLDVESLKFLFSKDFN
QLFHLRYIAISGDFNAIPLTFGKFWNLQTLILNTSTSESTLDVKADIWNM
LQLRHLHTNIPAKLQPPTATTSGKASCLQTLCMVAPESCEKEVLAKACHL
KKLSIRGQMAAFLGAYKGGINNLVELKCLEQLKLLNDVLYMNKAPHLPQT
FSQLVRTVKKLTLTNTRFAWSEADKLGQLESLEILKFKENAFAGDSWKPK
MGFSALRVLWIERAEFETWEASEINFPVLRNLVLMSCDKLETVPFELANL
SDLYEMRLENTSKAVKSAKAILESKTDKNIKFNLTIFP
Ligand information
Ligand ID
ATP
InChI
InChI=1S/C10H16N5O13P3/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(26-10)1-25-30(21,22)28-31(23,24)27-29(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H,23,24)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
Formula
C10 H16 N5 O13 P3
Name
ADENOSINE-5'-TRIPHOSPHATE
ChEMBL
CHEMBL14249
DrugBank
DB00171
ZINC
ZINC000004261765
PDB chain
9cc8 Chain F Residue 901 [
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Receptor-Ligand Complex Structure
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PDB
9cc8
Activation of the helper NRC4 immune receptor forms a hexameric resistosome.
Resolution
2.66 Å
Binding residue
(original residue number in PDB)
L151 V156 V157 F159 G187 L188 G189 K190 T191 T192 R295 L321 R325 P351 V355
Binding residue
(residue number reindexed from 1)
L120 V125 V126 F128 G156 L157 G158 K159 T160 T161 R264 L290 R294 P320 V324
Annotation score
4
External links
PDB
RCSB:9cc8
,
PDBe:9cc8
,
PDBj:9cc8
PDBsum
9cc8
PubMed
39094568
UniProt
A0A5J6DCT7
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