Structure of PDB 8u0u Chain F Binding Site BS01

Receptor Information
>8u0u Chain F (length=1126) Species: 666 (Vibrio cholerae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNVSIEEFTHFDFQLVPEPSPLDLVITESLKNHIEVNGVKSGALLPLPFQ
TGIGKTYTALNFLLQQMLEQVRSELKEENTGKKSKRLLYYVTDSVDNVVS
AKADLLKLIEKQTVKGEPRFTLEQQEYLKAQIVHLPNQSEQLLQCSDAVL
NDVLIGFNLNAERDVQAEWSAISGLRRHASNPEVKISLNRQAGYFYRNLI
DRLQKKQKGADRVLLSGSLLASVETLLPGEKIRNGSAHVAFLTTSKFLKG
FHNTRSRYSPLRDLSGAVLIIDEIDKQNQVILSELCKQQAQDLIWAIRTL
RANFRDHQLESSPRYDKIEDLFEPLRERLEEFGTNWNLAFAFNTENERPV
RLFSDRSFTHVSSATHKLSLKSDFLRRKNLIFSDLTRFVNEADVIYQWFL
GTMRKAVFQYWENVRGLLEGTFQEAVQSLLTHFNLQEFESAVYESFDTSS
SKSYHHTGLKLVEVAHNQGTRDTVNCKASFLNTSPSGVLADMVDAGAVIL
GISATARADTVIHNFDFKYLNERLGNKLLSLSREQKQRVNNYYHSRRNYK
DNGVVLTVKYLNSRDAFLDALLEEYKPEARSSHFILNHYLGIAESEQAFV
RSWLSKLLASIKAFISSPDNRYMLSLLNRTLDTTRQNINDFIQFCCDKWA
KEFNVKTKTFFGVNADWMRLVGYDEISKHLNTELGKVVVFSTYASMGAGK
NPDYAVNLALEGESLISVADVQLRSDIDSIYLEKPTQLLLSDDYSHTANQ
LCQFHQILSLQENGELSPKSAENWCRQQLMGMSRERSLQQYHQTSDYQSA
VRKYIEQAVGRAGRTSLKRKQILLFVDSGLKEILAEESRDPSLFSHEYVA
LVNKAKSARAVRRLFNLAQRNNKDGMLSIKALVHRLHNQPASKSDIQEWQ
DIRTQLLRYPTVAFQPERFNRLYLQSMTKGYYRYQGNLDGDPNSFEFFDR
VPYGDMVSEEDCSLATLVQNQYVRPWFERKGFACSWQKEANVMTPIMFTN
IYKGALGEQAVEAVLTAFDFTFEEVPNSIYERFDNRVIFAGIEQPIWLDS
KSEGYSSKIALVEEEFGPSKFIYVNALGDTSKPIRYLNSCFVETSPQLAK
VIEIPALIDDTNRTAVQELIKWLHHS
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8u0u Plasmid targeting and destruction by the DdmDE bacterial defence system.
Resolution3.04 Å
Binding residue
(original residue number in PDB)
V95 N137 Q138 Y194 R197 K246 K249 R257 F639 R669 T670 N704 A705 R709 T780 Q781 D787 E829 R830 Q833 H836
Binding residue
(residue number reindexed from 1)
V95 N137 Q138 Y194 R197 K246 K249 R257 F599 R629 T630 N664 A665 R669 T736 Q737 D743 E785 R786 Q789 H792
External links