Structure of PDB 8sp3 Chain F Binding Site BS01

Receptor Information
>8sp3 Chain F (length=469) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKELIYIEEPKILFAHGQKCTDARDGLALFGPLNNLYGIKSGVIGTKQGL
KIFRDYLDHIQKPIYNSNSITRPMFPGFEAVFDCKWESTGITFKEVTNED
IGKFLYNSSTHKRTYDLVSLFIDKIISANKNEDENVDVWFVIVPDEIYKY
CRPNSVLPAETYNYDAQFHDQFKARLLKHTIPTQIFRESTLAWRDFKNAF
GLPIRDFSKIEGHLAWTISTAAFYKAGGKPWKLSDVRNGVCYLGLVYKKV
EKSKNPRNACCAAQMFLDNGDGTVFKGEVGPWYNPKNGQYHLEPKEAKAL
LSQSLQSYKEQIGEYPKEVFIHAKTRFNHQEWDAFLEVTPKETNLVGVTI
SKTKPLKLYKTEGDYTILRGNAYVVNERSAFLWTVGYVPKIQTALSMEVP
NPLFIEINKGEADIKQVLKDILSLTKLNYNACIFADGEPVTLRFADKIGE
ILTASTDIKTPPLAFKYYI
Ligand information
>8sp3 Chain G (length=21) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ugacggcucuaaucuauuagu
.....................
Receptor-Ligand Complex Structure
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PDB8sp3 Oligomerization-mediated activation of a short prokaryotic Argonaute.
Resolution3.52 Å
Binding residue
(original residue number in PDB)		Y148 Q205 H207 R225 T228 F245 H251 L252 T255 N325 E436 N468 A469 I471 D474 G475
Binding residue
(residue number reindexed from 1)		Y148 Q167 H169 R187 T190 F207 H213 L214 T217 N287 E398 N430 A431 I433 D436 G437
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:8sp3, PDBe:8sp3, PDBj:8sp3
PDBsum8sp3
PubMed37494956
UniProtA0A316E3U6

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