Structure of PDB 8sp1 Chain F Binding Site BS01
Receptor Information
>8sp1 Chain F (length=92) Species:
10090
(Mus musculus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
KIRLYQFLLDLLRSGDMKDSIWWVDKDKGTFQFSSKHKEALAHRWGIQKG
NRKKMTYQKMARALRNYGKTGIIHKTAKKKLTYQFSGEVLGR
Ligand information
>8sp1 Chain C (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
aataagcggaagtggg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8sp1
Dissecting the hydration and dynamics of protein/DNA readout: Modeling with the ETS-family transcription factor PU.1
Resolution
1.62 Å
Binding residue
(original residue number in PDB)
S203 K206 R220 R230 R233 K243 K248
Binding residue
(residue number reindexed from 1)
S35 K38 R52 R62 R65 K75 K80
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8sp1
,
PDBe:8sp1
,
PDBj:8sp1
PDBsum
8sp1
PubMed
38042148
UniProt
P17433
|SPI1_MOUSE Transcription factor PU.1 (Gene Name=Spi1)
[
Back to BioLiP
]