Structure of PDB 8k9f Chain F Binding Site BS01

Receptor Information
>8k9f Chain F (length=397) Species: 324602 (Chloroflexus aurantiacus J-10-fl) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IPQLGQVQMLGLAAAVIGIGVLAAGYFLSPTSFFESYIYGYYVAMTIPLG
CLGFLMVQHLTGGAWGVTVRRMLEAGAATLPIMGLLFIPIALGYFDTYKA
LGLEHPLYEWANPEVVTPGGAEFDPIIAHKVPWLSPLWVTARIAIFFIIW
SALALTLRAWSRQQDAGGDAKKLATRMRRLSGIGVALFVITVTFFSFDVA
MSLDPHWFSTIYGAHYMANAGLMTLAFLALMMSRVRDAALFREYVSVKPI
HDIGKLIFAFTVLWTYMSYGQLVIIWSGDVAEFTPWYVHRTQHGWVFVAL
ALMLFAFALPFFVLLFRGTKRNLNTLATIAGWIVVMRFVDMAWIILPEFR
EHLWDIAITDVAAPIGLIGLVIALFAANVQQAPLLPLRDPNMEQLQN
Ligand information
Ligand IDJLQ
InChIInChI=1S/C35H70NO8P/c1-3-5-7-9-11-13-15-16-18-19-21-23-25-27-34(37)41-31-33(32-43-45(39,40)42-30-29-36)44-35(38)28-26-24-22-20-17-14-12-10-8-6-4-2/h33H,3-32,36H2,1-2H3,(H,39,40)/t33-/m1/s1
InChIKeyMMLCPRRXWWDUCM-MGBGTMOVSA-N
SMILES
SoftwareSMILES
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[CH](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCCCCCCC
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCC(=O)OCC(COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCCCC
CACTVS 3.385CCCCCCCCCCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OCCN)OC(=O)CCCCCCCCCCCCC
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCCC(=O)OC[C@H](COP(=O)(O)OCCN)OC(=O)CCCCCCCCCCCCC
FormulaC35 H70 N O8 P
Name[(2~{R})-3-[2-azanylethoxy(oxidanyl)phosphoryl]oxy-2-tetradecanoyloxy-propyl] hexadecanoate;
1-hexadecanoyl-2-tetradecanoyl-sn-glycero-3-phosphoethanolamine;
PE(16:0/14:0)
ChEMBL
DrugBank
ZINC
PDB chain8k9f Chain C Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8k9f Cryo-EM structure of HQNO-bound Alternative Complex III from the anoxygenic phototrophic bacterium Chloroflexus aurantiacus.
Resolution2.9 Å
Binding residue
(original residue number in PDB)
G60 V67 L70 T71
Binding residue
(residue number reindexed from 1)
G50 V57 L60 T61
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:8k9f, PDBe:8k9f, PDBj:8k9f
PDBsum8k9f
PubMed38299372
UniProtA9WEV7

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