Structure of PDB 8ifm Chain F Binding Site BS01

Receptor Information
>8ifm Chain F (length=412) Species: 1393122 (Thermoflavifilum thermophilum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NKIFISHATPEDDDFTRWLSLKLIGLGYEVWCDILFLDFWSTIEKEIREN
TCKFLIVSSTAGNKREGVLKELAVATKVKKHLQDDMFIIPLAIDENLSYD
DINIEIVRLNAIDFKKSWAKGLQDLLDAFEKQNVPPPDHSKSNLLYQQIF
LHDKQAIEKEETYDSNWFPIISFPNELRFHRYDWRLPKQFDVRTLAFPAI
RYKEYLCTFAWEYDFIHQLPKTETYNGQESIRISTSDILSGRYDTDFIRN
YECQRLIVQLINKAFELRMKDKNVREYQMSKTFAYWIEKGKLEKDKFEKI
KLVGKQKNKYWHFGISAAGKLYPSPVLMVSSHIIFTMDGINLIKSKSIQH
SSRRKQGKNWWNDKWREKLLAFIRFLSDDQNAIYLNVGSEEKILISNKPL
KFFGKMSYVTPS
Ligand information
>8ifm Chain H (length=20) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaacggcucuaaucuauuag
....................
Receptor-Ligand Complex Structure
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PDB8ifm Target ssDNA activates the NADase activity of prokaryotic SPARTA immune system.
Resolution2.92 Å
Binding residue
(original residue number in PDB)		K196 R209 Y210 K211 E260 M287 S288 H340 K354 H358 R361 R362
Binding residue
(residue number reindexed from 1)		K188 R201 Y202 K203 E252 M279 S280 H332 K346 H350 R353 R354
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0007165 signal transduction

View graph for
Biological Process
External links
PDB RCSB:8ifm, PDBe:8ifm, PDBj:8ifm
PDBsum8ifm
PubMed37932528
UniProtA0A1I7NFG5

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