Structure of PDB 8g6g Chain F Binding Site BS01

Receptor Information
>8g6g Chain F (length=78) Species: 8355 (Xenopus laevis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTE
HAKRKTVTAMDVVYALKRQGRTLYGFGG
Ligand information
>8g6g Chain I (length=157) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ccgcccatcagaatcccggtgccgaggccgctcaattggtcgtagacagc
tctagcaccgcttaaacgcacgtacgcgctgtcccccgcgttttaaccgc
caaggggattactccctagtctccaggcacgtgtcagatatatacatcga
ttgccgg
Receptor-Ligand Complex Structure
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PDB8g6g Ubiquitinated H2B as gatekeeper of the nucleosome acidic patch
Resolution2.93 Å
Binding residue
(original residue number in PDB)		R35 R45 I46 K79 T80
Binding residue
(residue number reindexed from 1)		R11 R21 I22 K55 T56
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0030527 structural constituent of chromatin
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005694 chromosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8g6g, PDBe:8g6g, PDBj:8g6g
PDBsum8g6g
PubMed39149911
UniProtP62799|H4_XENLA Histone H4

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