Structure of PDB 8cah Chain F Binding Site BS01 |
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| >8cah Chain 2 (length=1745)
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uaucugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugucuaaguauaagcaauuuauacagugaaacugcgaauggcuca
uuaaaucaguuaucguuuauuugauaguuacaugguauaacugugguaau
ucuagagcuaauacaugcuuaaaaucucgacccuuuggaagagauguauu
uauuagauaaaaaaucaaugucuucggacucuuugaugauucauaauaac
uuuucgaaucgcauggccuugugcuggcgaugguucauucaaauuucugc
ccuaucaacuuucgaugguaggauaguggccuaccaugguuucaacgggu
aacggggaauaaggguucgauuccggagagggagccugagaaacggcuac
cacauccaaggaaggcagcaggcgcgcaaauuacccaauccuaauucagg
gagguagugacaauaaauaacgauacagggcccauucgggucuuguaauu
ggaaugaguacaauguaaauaccuuaacgaggaacaauuggagggcaagu
cuggugccagcagccgcgguaauuccagcuccaauagcguauauuaaagu
uguugcaguuaaaaagcucguaguugaacuuugggcccgguuggccgguc
ggauuuccaacggggccuuuccuucuggcuaaccuugagcuuggcgaacc
aggacuuuuacuuugaaaaaauuagaguguucaaagcaggcguauugcuc
gaauauauuagcauggaauaauagaauaggacguuugguucuauuuuguu
gguuucuaggaccaucguaaugauuaauagggacggucgggggcaucagu
auucaauugucagaggugaaauucuuggauuuauugaagacuaacuacug
cgaaagcauuugccaaggacguuuucauuaaucaagaacgaaaguuaggg
gaucgaagaugaucagauaccgucguagucuuaaccauaaacuaugccga
cuagggaucgggugguguuuuuuuaaugacccacucggcaccuuacgaga
aaucaaagucuuuggguucuggggggaguauggucgcaaggcugaaacuu
aaaggaauugacggaagggcaccaccaggaguggagccugcggcuuaauu
ugacucaacacggggaaacucaccagguccagacacaauaaggauugaca
gauugagagcucuuucuugauuuugugggugguggugcauggccguucuu
aguugguggagugauuugucugcuuaauugcgauaacgaacgagaccuua
accuacuaaauaguggugcuagcauuugcugguuauccacuucuuagagg
gacuaucgguuucaagccgauggaaguuugaggcaauaacaggucuguga
ugcccuuagacguucugggccgcacgcgcgcuacacugacggagccagcg
agucuaaccuuggccgagaggucuugguaaucuugugaaacuccgucgug
cuggggauagagcauuguaauuauugcucuucaacgaggaauuccuagua
agcgcaagucaucagcuugcguugauuacgucccugcccuuuguacacac
cgcccgucgcuaguaccgauugaauggcuuagugaggccucaggaucugc
uuagaucagagcggagaauuuggacaaacuuggucauuuagaggaacuaa
aagucguaacaagguuuccguaggugaaccugcggaaggaucauu |
...<<<<<.{.((((>>>>><<<<.<<<<<<...<.<...<......<<<
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......<<<..<<..<<....<<<..........<.....<<.<<<....
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<<<<<......(((.{((.........................>>>>>>.
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..>>>..>....>.>.....<<<<<<<...<<......>>...>>>>.>>
>......<<..<...........>..>>.........<<<<<((......
<<<<.....<<..))>>.......>>>>.>>>>>..>>>>>>>>>>....
.....<<<[[.....<.<<...<<<.<<....<<<<<<.<<<<<......
....>..>>>>.>>>>>>.....<<<<<....................>>
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...>>......>>.>>..>>>.........<<<..<<<<<<<<.....))
.}))).>>>>>>>>.>>>.....>>....<<<<<<.<<...<<<<..<<.
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]]>>...>>.....>>>.>>>.<<<......<<<<....>>>>....>>>
..)))).}<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<<<......
<<........>>..........<<<<<.<....<<<<<........<<.<
<<........>>>.>>......>>>>>...<<.<<<..<<.<<<<<<...
.<<<.<<<<<....>>>...<<<......>>>...>>.>>>....<<<<<
.<<..<<<<..<<<<<.<<<<<<....>>>>>>...>>>>>..>>>>.>>
....<<<<<<.....>>>>>>.......>>>>>....>>>.>>>.....>
>>>>>>.....>.>>>>>...>>.>>>>.>>>.....<<<<<<<......
<<.....<<..<<<<....>>>>..>>....>>.......>>>>>>>...
...<....<<<<<<..........>>>>>>....>.....>>>>>>....
<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>...
.<..<<.<..<<<<.<<....<<<<<<<<.<<<..<.<<..<...<<<<<
<<.<..>.>>>>>>>...>..>>.>..>>>.>>>>>>>>...>>.>>>>.
..>.>>...>.....<<<<<<<<<<..>>>>>>>>>>........ |
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| PDB | 8cah Molecular basis for recognition and deubiquitination of 40S ribosomes by Otu2. |
| Resolution | 3.0 Å |
Binding residue
(original residue number in PDB) | Q8 F10 K14 S15 V19 K30 E40 E42 R66 G71 G72 G73 H74 V75 S76 Q77 R114 I118 S121 R122 R123 P124 E125 P126 K127 K128 F129 G130 G133 R135 S136 R137 F138 Q139 K140 S141 Y142 R143 |
Binding residue
(residue number reindexed from 1) | Q6 F8 K12 S13 V17 K28 E38 E40 R64 G69 G70 G71 H72 V73 S74 Q75 R112 I116 S119 R120 R121 P122 E123 P124 K125 K126 F127 G128 G131 R133 S134 R135 F136 Q137 K138 S139 Y140 R141 |
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