Structure of PDB 6z48 Chain F Binding Site BS01

Receptor Information
>6z48 Chain F (length=251) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPW
DKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDI
ALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETGQP
SVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGG
PFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVIDQF
G
Ligand information
>6z48 Chain E (length=29) Species: 9606 (Homo sapiens) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
EADCGLRPLFEKKSLEDKTERELLESYID
Receptor-Ligand Complex Structure
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PDB6z48 Synthesis and direct assay of large macrocycle diversities by combinatorial late-stage modification at picomole scale.
Resolution2.27 Å
Binding residue
(original residue number in PDB)		E23 I24 G25 M26 P28 W29 S48 D116 H119 P120 C122 Y134 K135 R137 N159 K202 P204 R206 W207
Binding residue
(residue number reindexed from 1)		E8 I9 G10 M11 P13 W14 S34 D113 H116 P117 C119 Y134 K135 R137 N157 K205 P207 R211 W212
Enzymatic activity
Enzyme Commision number 3.4.21.5: thrombin.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0005509 calcium ion binding
Biological Process
GO:0006508 proteolysis
GO:0007596 blood coagulation

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Molecular Function
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Biological Process
External links
PDB RCSB:6z48, PDBe:6z48, PDBj:6z48
PDBsum6z48
PubMed35780129
UniProtP00734|THRB_HUMAN Prothrombin (Gene Name=F2)

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