Structure of PDB 6vmx Chain F Binding Site BS01

Receptor Information
>6vmx Chain F (length=267) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSHSMRYFYTSVSRPGRGEPRFISVGYVDDTQFVRFDSDAASPREEPRAP
WIEQEGPEYWDRNTQIYKAQAQTDRESLRNLRGYYNQSEAGSHTLQSMYG
CDVGPDGRLLRGHDQYAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAA
REAEQRRAYLEGECVEWLRRYLENGKDKLERADPPKTHVTHHPISDHEAT
LRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDRTFQKWAAVVVP
EEQRYTCHVQHEGLPKP
Ligand information
>6vmx Chain H (length=9) Species: 10377 (Human herpesvirus 4 strain B95-8) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
RPPIFIRRL
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6vmx A Shared TCR Bias toward an Immunogenic EBV Epitope Dominates in HLA-B*07:02-Expressing Individuals.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		Y7 R62 N63 I66 Y67 Q70 T73 N80 Y99 Y116 Y123 T143 W147 Q155 R156 Y159 E163 W167 Y171
Binding residue
(residue number reindexed from 1)		Y7 R62 N63 I66 Y67 Q70 T73 N80 Y99 Y116 Y123 T143 W147 Q155 R156 Y159 E163 W167 Y171
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:6vmx, PDBe:6vmx, PDBj:6vmx
PDBsum6vmx
PubMed32817371
UniProtP01889|HLAB_HUMAN HLA class I histocompatibility antigen, B alpha chain (Gene Name=HLA-B)

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