Structure of PDB 6sna Chain F Binding Site BS01

Receptor Information
>6sna Chain F (length=237) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FDLYQHVTDRIIAQMPLRSNGEAYRGINVVMLWLTAAEKGYRSAYWFTYR
QAKELGGQVRKGEKGSTVVKFGTIEREKKIPYLKGYTVFNADQIDGLPEQ
YHRDLGTAADPELDAFFAATGADIRTSSEPRAYYNPTGDYIHMPPIATFH
SAAGYYATLAHEATHWTGHKSRLDRFAFEELIAEIGNCMLCASLGLIPAY
VQSWLRALKDDKRLIFKAATEAQKAADLLQENAANFQ
Ligand information
Ligand IDMN
InChIInChI=1S/Mn/q+2
InChIKeyWAEMQWOKJMHJLA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mn+2]
CACTVS 3.341[Mn++]
FormulaMn
NameMANGANESE (II) ION
ChEMBL
DrugBankDB06757
ZINC
PDB chain6sna Chain F Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6sna ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range.
Resolution2.7 Å
Binding residue
(original residue number in PDB)		H201 H205 E229
Binding residue
(residue number reindexed from 1)		H161 H165 E180
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003697 single-stranded DNA binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6sna, PDBe:6sna, PDBj:6sna
PDBsum6sna
PubMed32348296
UniProtQ6I6B2

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