Structure of PDB 6nf8 Chain F Binding Site BS01

Receptor Information
>6nf8 Chain F (length=124) Species: 9913 (Bos taurus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MPRYELALILKAMQRPETAAALKRTLEALMDRGAVVRSLENLGERTLPYK
MSAHSQRHTRGGYFLVDFYAPTTTVASIMEHLSRDIDVIRPNVVKHPLTQ
EVKECEGIVPVPLEEKLYSTKKRK
Ligand information
>6nf8 Chain A (length=952) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
agguuuggucccagccuuccuguuaacucuuaauaaacuuacacaugcaa
gcaucuacaccccagugagaaugcccucuagguuauuaaaacuaagagga
gcuggcaucaagcacacacccuguagcucacgacgccuugcuuaaccaca
ccccacgggaaacagcagugacaaaaauuaagccauaaacgaaaguuuga
cuaaguuauauuaauuaggguugguaaaucucgugccagccaccgcgguc
auacgauuaacccaagcuaacaggaguacggcguaaaacguguuaaagca
ccauaccaaauaggguuaaauucuaacuaagcuguaaaaagccaugauua
aaauaaaaauaaaugacgaaagugacccuacaauagccgacgcacuauag
cuaagacccaaacugggauuagauaccccacuaugcuuagcccuaaacac
agauaauuacauaaacaaaauuauucgccagaguacuacuagcaacagcu
uaaaacucaaaggacuuggcggugcuuuauauccuucuagaggagccugu
ucuauaaucgauaaaccccgauaaaccucaccaauucuugcuaauacagu
cuauauaccgccaucuucagcaaacccuaaaaaggaaaaaaaguaagcgu
aauuaugauacauaaaaacguuaggucaagguguaaccuaugaaauggga
agaaaugggcuacauucucuacaccaagagaaucaagcacgaaaguuauu
augaaaccaauaaccaaaggaggauuuagcaguaaacuaagaauagagug
cuuaguugaauuaggccaugaagcacgcacacaccgcccgucacccuccu
caaauagauucagugcaucuaacccuauuuaaacgcacuagcuacaugag
aggagacaagucguaacaagguaagcauacuggaaagugugcuuggauaa
au
<<<.<.....[[.>.>>><<<<<<<.<...<<<<<<<..<.<<<.<<<..
...............<......<<<<<<<.<<<<.....>>>>.>>>>>.
>>.<<<....<<<..<<<...>>>.>>>......>>>..<.....>.>..
<<.....>>.....>>>>>>>.........<<....<<<<....>>>>..
>>...>>.>>>>>....<<<<<<<<.....(((.....((.>>>))....
...)))..>>>>>..>.>>>>>>>.....<<.((.....<<<<....<..
..........<<<<<<.......<<<.<<.<<<......>>>..>>.>>>
................<....>..>>>>>>......>....>>>>...<<
<<<<<...<<...<<<<.........>>>>...>>>>>>>>..>......
.<<<<<<<......))..>>>>>>>..>>.<<<.......<<<....>>>
.....>>>...]]...<<<<<.<<<<<<....<<..<<<<<...<<<<<<
<<......<<........>>..........<<<.<<<...........<<
.<<<...<<<<<.......<<..<<<<<....>>>.......>>..>>..
....<<.....>>..........>>>...>>.>>>>>....>>>.>>>..
.>.>>>>>>>......<<<<......>>>>.........<....<<<<<<
........>>>>>>....>.....>>>>>.....<<<<<<<.........
>>>>>>>......>>....>>>>>>>>>.>>.......<<.<...<<<<<
<.............<<....<........>....>>.............>
>>>>>....>.>>.........<<<<<<<<<....>>>>>>>>>......
..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6nf8 Structure of Human Mitochondrial Translation Initiation Factor 3 Bound to the Small Ribosomal Subunit.
Resolution3.48 Å
Binding residue
(original residue number in PDB)		Y49 R57 T72 R90 V93 K95 K103 Y118 S119 K124
Binding residue
(residue number reindexed from 1)		Y49 R57 T72 R90 V93 K95 K103 Y118 S119 K124
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
GO:0070181 small ribosomal subunit rRNA binding
Biological Process
GO:0006412 translation
GO:0032543 mitochondrial translation
Cellular Component
GO:0005737 cytoplasm
GO:0005739 mitochondrion
GO:0005743 mitochondrial inner membrane
GO:0005763 mitochondrial small ribosomal subunit
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6nf8, PDBe:6nf8, PDBj:6nf8
PDBsum6nf8
PubMed30677741
UniProtP82931|RT06_BOVIN Small ribosomal subunit protein bS6m (Gene Name=MRPS6)

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