Structure of PDB 6md3 Chain F Binding Site BS01

Receptor Information

>6md3 Chain F (length=179) Species: 5691 (Trypanosoma brucei) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

SDIGCGTVGCKLCASTASSLVPTAPIMIPDAVTILHNMNAMEDARIQNIV
LLSTVMSEVQERNKAIYARLQRLVGGERKQCYVFSNDRHEQTHCVMQSEE
TRSDFNDRCVRVAGRWYAQHLALAFPAVTGVAEIPSVVLVSHDKLLQSNI
SNLSCLTLRQFLAGCVTAGTDLLEMILEH

Ligand information

Ligand ID

InChI

InChI=1S/Mn/q+2

InChIKey

WAEMQWOKJMHJLA-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 OpenEye OEToolkits 1.5.0	[Mn+2]
CACTVS 3.341	[Mn++]

Formula

Name

MANGANESE (II) ION

PDB chain

6md3 Chain F Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	6md3 Trypanosoma brucei RRP44 is involved in an early stage of large ribosomal subunit RNA maturation.
Resolution	2.29 Å
Binding residue (original residue number in PDB)	D140 D176
Binding residue (residue number reindexed from 1)	D107 D143
Annotation score	4

Enzymatic activity

Enzyme Commision number

External links

PDB	RCSB:6md3, PDBe:6md3, PDBj:6md3
PDBsum	6md3
PubMed	30593255
UniProt	Q95Z12

[Back to BioLiP]